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Table 1 Summary data on the samples collected and RNA sequencing output

From: Blood signatures for second stage human African trypanosomiasis: a transcriptomic approach

Sample code Sex Age Disease stage Sample type WBC (10e4) Tryps (10e4) RNA (μg) Input reads GRCH38 mapped Mapped >1X % reads aligned
HC57 F 35 II Csf 38 13 0.2 98,270,230 69,285,928 69,285,928 70.5
HC60 F 17 II Csf 120 8 0.7 96,648,788 90,492,957 74,616,029 93.6
HC71 M 20 II Csf na 50 0.5 73,865,867 56,272,142 29,457,308 76.2
HB73 M 30 I Blood na 4500 8.1 123,187,268 93,326,386 23,674,401 75.8
HB71 M 20 II Blood na 5100 8 161,694,848 140,878,954 47,536,097 87.1
HB80 F 23 I Blood na 2100 2.6 149,174,871 45,622,196 6,551,610 30.6
HB81 F 6 I Blood na 1100 3.0 117,399,517 87,010,317 34,355,813 74.1
Control_1 M 12 Blood na na 5.3 348,313,772 294,908,395 73,030,586 84.7
Control_2 M 22 Blood na na 4.7 119,677,407 100,002,617 82,853,862 83.6
Control_3 M 17 Blood na na 7 87,008,230 71,454,798 28,084,167 82.1