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Fig. 4 | BMC Medical Genomics

Fig. 4

From: AMLVaran: a software approach to implement variant analysis of targeted NGS sequencing data in an oncological care setting

Fig. 4

Generic model for A/P-score calculation. a Visualization of the generic, system-independent description in SSDL format. b The graphical panel for selecting and adapting the parameters for calculation of artifact and polymorphism scores is derived from the SSDL code shown in a. Elements such as categories, simple combinations like AND and OR, checkboxes and adjustable thresholds can be freely combined. The thresholds can be adapted, and the score calculation strategy can be fully customized. By default, a score calculation scheme based on appreci8’s complex filtering strategy is provided (see Additional file 4)

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BMC Medical Genomics

ISSN: 1755-8794

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