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Table 4 GO analysis of network-based feature types

From: Comparative evaluation of network features for the prediction of breast cancer metastasis

Feature TypeCo-expression NetworkPPI network
 TermCountBenjamini corrected p-valueTermCountBenjamini corrected p-value
NOGrowth factor244.10E-02G-protein coupled receptor signaling pathway499.40E-01
 Jak-stat signaling pathway281.70E-01Jak-stat signaling pathway194.30E-01
 Cell junction495.90E-01Cell junction421.80E-01
 Olfactory transduction136.40E-01Extracellular region1116.60E-02
MEANRNA transport333.30E-01Transmembrane4791.60E-24
 Lysosome405.00E-01Extracellular matrix372.30E-03
 Antigen processing and presentation193.60E-01Bicellular tight junction148.80E-01
 Endothelial cell chemotaxis59.90E-01Notch signaling pathway69.2E-1
    Leukocyte transendothelial migration109.7E-01
MAXIMUMCell cycle1322.40E-12Cell cycle1222.70E-10
 Antigen processing and presentation277.70E-03Positive regulation of canonical Wnt signaling pathway361.60E-05
 DNA repair455.20E-02T-Cell receptor signaling pathway511.20E-09
 Cardiac epithelial to mesenchymal transition59.9E-01Cell-cell adherens junction703.50E-05
    Positive regulation of blood vessel endothelial cell migration75.7E-01
MINIMUMCell cycle1162.00E-06Cell cycle1365.90E-14
 p53 signaling pathway59.00E-01p53 signaling pathway194.90E-02
 Rho cell motility signaling pathway79.60E-01DNA repair412.80E-01
MEDIANCell cycle1242.80E-09Sensory transduction269.90E-01
 DNA repair471.70E-02Telomere49.80E-01
 CSonic Hedgehog (SHH) Receptor Ptc1 Regulates cell cycle39.90E-01Ribosome179.80E-01
VARIANCECell cycle1386.30E-18Intracellular steroid hormone receptor signaling pathway79.40E-01
 DNA repair478.80E-04Extracellular space1772.10E-01
 Positive regulation of telomere maintainance128.00E-02Immune response649.50E-01
EDGECell cycle1471.80E-22Cell cycle1674.80E-30
 Positive regulation of telomere maintainance151.30E-03Cell-cell adherens junction845.00E-10
 DNA repair447.20E-03Positive regulation of epithelial to mesenchymal transition79.5E-01
 Cell-cell adhesion481.30E-01Regulation of cell motility69.8E-01