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Fig. 2 | BMC Medical Genomics

Fig. 2

From: Pseudogene-gene functional networks are prognostic of patient survival in breast cancer

Fig. 2

Prognostic gene models in BRCA. a Kaplan-Meier survival plot for LOC387646. b Kaplan-Meier survival plot for GALP. c Kaplan-Meier survival plot for STXBP5. D) Decision tree based on only gene expression data excluding clinical variables. e Decision tree based on gene expression and clinical variables. f Histology staining from the Human Protein Atlas [34] for STXBP5 in normal tissue (includes: gender, age, tissue type, and antibody used in bold on the histology slide). For example, F35 means a 35-year-old female, and HPA049727 is the antibody. The tissue staining is used to show that the specific protein product is present in normal tissue. Thus regulating that gene (STXBP5) at the mRNA level might affect the phenotype because the protein product is present and can be a regulation target

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