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Table 5 Interactions detected by \(\widehat {IGmod}_{0}\) but not logistic regression

From: Modified entropy-based procedure detects gene-gene-interactions in unconventional genetic models

SNP pairpos SNP 1pos SNP 2SubmodelMAF 1MAF 2p SNP 1p SNP 2TS pairp value
rs1063355:rs77744343273569232765556Multi0.370.449.68E-145.09E-190.0189616.31E-09
rs1063355:rs92753743273569232776504Multi0.370.359.68E-141.22E-560.0203151.11E-09
rs1063355:rs92753883273569232777062Multi0.370.349.68E-142.54E-530.0187748.01E-09
rs1063355:rs92753903273569232777134Multi0.370.359.68E-141.22E-560.0203151.11E-09
rs1063355:rs92753933273569232777417Multi0.370.359.68E-141.47E-560.0203431.07E-09
rs1063355:rs92754063273569232777933Multi0.370.349.68E-142.29E-560.0206996.78E-10
rs1063355:rs92754073273569232778015Multi0.370.349.68E-141.44E-530.0216651.95E-10
rs1063355:rs92754183273569232778222Multi0.370.359.68E-147.88E-570.0202761.17E-09
rs1063355:rs92754243273569232778554Multi0.370.359.68E-147.88E-570.0203141.11E-09
rs1063355:rs92754253273569232778852Multi0.370.349.68E-141.96E-520.0198482.03E-09
rs1063355:rs92754273273569232778893Multi0.370.359.68E-146.95E-570.0200231.62E-09
rs1063355:rs92754283273569232778956Multi0.370.359.68E-143.13E-560.0199461.79E-09
rs1063355:rs92754393273569232779499Multi0.370.349.68E-146.63E-540.0200841.50E-09
rs2256175:rs92752243148842832767856Multi incompl0.440.373.24E-156.52E-900.0181581.76E-08
rs1055569:rs44240663154806132462406Multi incompl0.320.453.23E-081.07E-660.0188687.11E-09
rs1055569:rs38179733154806132469089Multi incompl0.320.453.23E-081.91E-670.0193074.06E-09
rs1055569:rs20765303154806132471794Multi incompl0.320.453.23E-084.92E-640.0188587.20E-09
rs9267911:rs31303203231308832331236Multi incompl0.410.283.26E-362.10E-320.0201011.46E-09
rs1055569:rs23951573154806132456123Epi0.320.383.23E-082.27E-600.0174744.18E-08
rs2844509:rs38179633161890332476065Epi0.210.409.59E-197.20E-580.0180052.13E-08
rs6941112:rs92755953205459332789333Epi0.370.326.08E-169.50E-630.0174364.38E-08
rs9268615:rs69036083251086732536263Epi0.470.236.58E-448.39E-530.0310018.87E-16
rs2395185:rs77456563254114532788948Epi0.430.226.41E-711.71E-380.0190935.33E-09
rs477515:rs77456563267766932788948Epi0.420.226.18E-671.71E-380.0267652.46E-13
rs2516049:rs77456563267837832788948Epi0.420.221.83E-661.71E-380.0262155.08E-13
rs382259:rs26470123231700532772436XOR0.220.296.52E-282.26E-540.0173554.86E-08
rs382259:rs28567173231700532778286XOR0.220.296.52E-285.05E-560.0177233.05E-08
rs382259:rs28583053231700532778442XOR0.220.296.52E-285.05E-560.0177233.05E-08
rs382259:rs92755723231700532786977XOR0.220.316.52E-282.86E-590.0182081.65E-08
rs412657:rs4058753231906332323166Other0.350.502.94E-425.21E-210.0178832.49E-08
rs412657:rs31155733231906332326821Other0.350.502.94E-422.44E-200.0176843.20E-08
  1. Position (pos) of SNPs as base pairs on chromosome 6, submodel of interaction as detailed in Table 6, minor allele frequencies (MAF), p SNP 1 and p SNP 2 as p-values from 1st order calculation, TS pair as value of the test statistic from 2nd order calculation, p-value as result from 2nd order calculation