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Table 2 Measurements on the medium test dataset (100,000 records). The notation is the same as the one used in Table 1

From: iDASH secure genome analysis competition 2018: blockchain genomic data access logging, homomorphic encryption on GWAS, and DNA segment searching

Medium

Complete

Accurate

Insertion

Query

Disk

Memory

BP

Yes

No

19:18:11

00:00:47

7.870 GB

53 MB

BP2*

Yes

Yes

28:50:30

00:00:04

3.270 GB

54 MB

CSI

Yes

No

01:27:51

00:00:27

1.652 GB

10 MB

Gerstein

Yes

Yes

00:22:56

00:00:54

0.700 GB

30 MB

JUICE

Yes

No

02:04:17

00:04:16

4.300 GB

5 MB

Sandia

Yes

Yes

01:23:51

00:00:47

2.695 GB

28 MB

SUCloud

Yes

No

00:12:34

00:00:30

0.552 GB

15 MB

YCao

Yes

Yes

03:05:33

00:00:16

2.558 GB

32 MB