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Table 3 Measurements on the large test dataset (200,000 records). The notation is the same as Table 1. BP2 and YCao did not complete the insertion process within the time limit (70 h)

From: iDASH secure genome analysis competition 2018: blockchain genomic data access logging, homomorphic encryption on GWAS, and DNA segment searching

Large

Complete

Accurate

Insertion

Query

Disk

Memory

BP

Yes

No

66:27:49

00:01:00

5.570 GB

78 MB

BP2*

No

No

–

–

–

–

CSI

Yes

No

02:52:13

00:01:10

2.452 GB

10 MB

Gerstein

Yes

Yes

00:55:46

00:02:11

1.300 GB

54 MB

JUICE

Yes

No

04:39:10

00:12:56

7.800 GB

6 MB

Sandia

Yes

Yes

04:07:17

00:01:48

5.438 GB

41 MB

SUCloud

Yes

No

00:27:43

00:01:05

1.227 GB

15 MB

YCao

No

No

–

–

–

–