Skip to main content

Table 4 Primer sequences used for genotyping in ARMS-PCR

From: Association of PICK1 and BDNF variations with increased risk of methamphetamine dependence among Iranian population: a case–control study

SNPs

Primers

Sequences

Primer Length (bp)

PCR products (bp)

rs6265

FO

CTACAGTTCCACCAGGTGAGAAGAGTG

27

400

RO

ATGGACATGTTTGCAGCATCTAGGTA

26

FI (c)

TGGTCCTCATCCAACAGCTCTTCTATaAC

29

253

RI(t)

TTGGCTGACACTTTCGAACcCA

22

201

rs713729

FO

CTTTCTAGCGGAATCCCGACTGTG

24

407

RO

CAGTGAAAAAGCAAACCAGGACACTG

26

FI(a)

CTTCTCATTCTTGAGGTCTGACCCACA

27

196

RI(t)

AGGTGGTCAGAAAGCCCCTCAGA

23

265

rs2076369

FO

CATGTTGCCCAAGCTGGTCTCAAACTC

27

299

RO

CTGGACACCCGTAACTGCTCTGACC

35

FI(g)

AGGAGTCTCAGTCCAGAACAGTCTTGACG

29

191

RI(t)

CTCCACACCCTGAGCCCCTTCTCA

24

165

  1. Expected product size in bps depending on the SNPs. FO: Forward outer primer; FI: Forward inner primer; RI: Reverse inner primer; RO: Reverse outer primer; bp: Base pairs; ARMS-PCR: Amplification refractory mutation system-polymerase chain reaction; SNP: Single nucleotide polymorphism