Table 1 The top 30 differentially expressed lncRNAs and mRNAs between HCC and normal tissues
Rank | lncRNA | mRNA | ||||
|---|---|---|---|---|---|---|
GeneSymbol | Regulation | Fold change | GeneSymbol | Regulation | Fold change | |
1 | ENST00000583827.1 | Up | 21.11 | HEPACAM | Down | 49.56 |
2 | uc010isf.1 | Down | 17.76 | CLEC4G | Down | 44.74 |
3 | XR_109840.2 | Down | 16.41 | CXCL14 | Down | 38.37 |
4 | TCONS_00023687 | Down | 15.08 | COLEC10 | Down | 35.43 |
5 | ENST00000596540.1 | Up | 12.01 | SLC25A47 | Down | 31.15 |
6 | RNA147023|p0127_imsncRNA205 | Up | 11.88 | KIF20A | Up | 26.44 |
7 | ENST00000521666.1 | Up | 11.30 | HHIP | Down | 26.17 |
8 | ENST00000559280.1 | Up | 10.96 | CLEC1B | Down | 23.87 |
9 | NR_027462.1 | Down | 10.94 | CYP2E1 | Down | 23.85 |
10 | ENST00000591629.1 | Up | 10.92 | TOP2A | Up | 22.89 |
11 | ENST00000437781.1 | Up | 10.75 | PLIN2 | Down | 22.72 |
12 | ENST00000568523.1 | Down | 10.56 | THBS4 | Up | 22.61 |
13 | TCONS_00005551 | Down | 10.26 | MEP1A | Up | 22.53 |
14 | ENST00000597260.1 | Down | 10.05 | CYP26A1 | Down | 22.18 |
15 | TCONS_00012039 | Up | 9.96 | SPP1 | Up | 19.81 |
16 | ENST00000597655.1 | Up | 9.74 | AKR1B10 | Up | 19.44 |
17 | TCONS_00008984 | Up | 9.73 | HPD | Down | 18.85 |
18 | ENST00000451264.1 | Down | 9.60 | HEPN1 | Down | 18.42 |
19 | ENST00000560278.1 | Up | 9.47 | MELK | Up | 18.35 |
20 | ENST00000608652.1 | Up | 9.39 | BUB1 | Up | 17.82 |
21 | ENST00000600679.1 | Up | 8.98 | FCN2 | Down | 17.76 |
22 | ENST00000609879.1 | Up | 8.94 | NEB | Up | 17.22 |
23 | XR_158989.2 | Down | 8.73 | MKI67 | Up | 17.19 |
24 | ENST00000584351.1 | Up | 8.62 | CD5L | Down | 17.07 |
25 | ENST00000432120.1 | Up | 8.58 | SPINK1 | Up | 17.01 |
26 | ENST00000415810.1 | Up | 8.35 | DEPDC1 | Up | 16.93 |
27 | TCONS_00023870 | Down | 8.19 | HHIP | Down | 16.84 |
28 | TCONS_00023860 | Down | 8.19 | BMP10 | Down | 16.45 |
29 | TCONS_00016038 | Up | 8.00 | MAGEA2B | Up | 16.43 |
30 | ENST00000566797.1 | Down | 7.91 | CDKN3 | Up | 15.93 |