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Table 2 Comparison of gDNA extraction QC, library preparation QC metrics

From: Validation of whole genome sequencing from dried blood spots

Subject details

DBS

Blood

ID

Age (yrs)

Sex

A260/280

DNA Yield (µg)

Lib conc (ng/µl)

Lib yield (ng)

Lib avg size (bp)

Yield (Mb)

Average coverage

A260/280

DNA Yield (µg)

Lib conc (ng/µl)

Lib yield (ng)

Lib avg size (bp)

Yield (Mb)

Average coverage

S-10438

70

F

1.700

0.169

11.5

345

598

1,31,491

49.09

1.922

4.52

10.9

327

628

1,44,728

45.50

S-10439

43

F

1.873

0.175

11.0

330

603

1,35,060

48.34

1.913

3.35

11.8

354

627

1,43,382

45.88

S-10440

58

M

2.000

0.195

10.1

303

622

1,32,497

45.15

1.934

4.54

11.0

330

637

1,35,938

45.50

S-10441

60

M

1.830

0.212

10.5

315

606

1,41,057

48.20

1.961

2.19

12.1

363

629

1,44,174

47.40

S-10442

68

M

2.000

0.255

10.6

318

619

1,30,753

44.80

1.984

2.04

10.7

321

627

1,33,614

44.74

S-10444

44

M

1.897

0.490

11.5

345

636

1,44,365

45.16

1.907

4.93

11.2

336

637

1,33,992

50.14

S-10447

85

F

1.738

0.239

11.2

336

608

1,26,642

49.31

1.896

2.94

11.1

333

617

1,45,442

43.40

S-10450

45

F

1.793

0.282

11.3

339

612

1,26,180

45.05

1.899

5.70

12.2

366

611

1,34,580

43.39

S-10452

57

M

1.792

0.234

11.1

333

619

1,54,719

48.81

1.897

5.60

11.8

354

641

1,46,397

53.02

S-10454

52

F

1.991

0.289

11.2

336

599

1,59,173

52.28

1.923

1.94

11.0

330

573

1,54,437

55.00

S-10457

48

M

1.872

0.285

12.2

366

634

1,52,925

44.84

1.895

1.40

10.3

309

663

1,33,573

52.09

S-10458

53

F

1.889

0.534

10.6

318

644

1,09,371

45.49

1.902

3.79

11

330

566

1,35,132

38.09