Skip to main content

Table 4 Composition of repeats unit of ABL1-MS1 alleles

From: VNTR polymorphism in the breakpoint region of ABL1 and susceptibility to bladder cancer

Repeat unit

Sequences

Consensus

GGAATCGAGGAACCTCTCAGGGCTTTGTGTTGGGACGCTGACACACTGCATTAGTACTTTCTAGACTGTGAGCAGG

MS1-1

GGAATCAAGGAACCTCTCAGGGCTTTGTGTTGGGACGCTGACACACTGCATTAGTACCTTCTAGACTATGAGCAGG

MS1-2

GGAATCGAGGAACCTCTCAGGGCTTTGTGTTGGGACACTGACTCACTGCATTAGTACCTTCTAGACTATGAGCAGG

MS1-3

GGAATCGAGGGACCTCTCAGGGCTTTGTGTTGGGACGCTGACACACTGCATTAGTACTTTCTAGACTGTGAGCAGG

MS1-4

GGAATCGAGGAACCTCTCAGGGCTTTGTGTTGGGACGCTGACACACTGCATTAGTACTTTGTAGACTGTGAGCAGG

MS1-5

GGAATCGAGGAACCTCTCAGGGCTTTGTGTTGGGACGCTGACACACTGCATTAGTACTTTCTAGACTGTGAGCAGG

MS1-6

GGAATCGAGGAACCTCTCAGGGCTTTGTGTTGGGACACTGACTCACTGCATTAGTACTTTCTAGACTGTGAGCAGG

MS1-7

GGAATCGAGGAACCTCTCAGGGCTTTGTGTTGGGACGCTGACACACTGCATTAGTACTTTCTAGACTGTGAGCAGA

MS1-8

GGAATCGAGGAACCTCTCAGGGCTTTGTGTTGGGACGCTGACACACTGTATTAGTACTTTCTAGACTGTGAGCAGA

MS1-9

GGAATCGAGGAACCTCTCAGGGCTTTGTGTTGGGACACTGACTCACTGCATTAGGACTTTCTAAACTGGGAACAGG

MS1-10

GGGATCGAGGAACCTCTCAGGGCTTTGTGTTGGGACGCTGACACACTGCATTAGTACTTTGTAGACTGTGAGCAGG

MS1-11

GGAATCGAGGAACCTCTCAGGGCTTTGTGTTGGGACGCTGACACACTGCATTGGTACTTTGTAGACTGTGAGCAGG

MS1-12

GGAATCGAGGAACCTCTCAGGGCTTTGTGTTGGGACACTGACTCACTGGATTAGTACTTTCTAGACTGTGAGCAGG

MS1-13

GGAATCGAGGAACCTCTCAGGGCTTTGTGTTGGGAACCAGACTCACTGCATTAATACTTTCTAGACTGTGAACAGG

MS1-14

GGAATCGAGGAACCTCTCAGGGCTTTGTGTTGGGACACTGACTCACTGCATTAGTACCCTCTAGACTATGAGCAGG

MS1-15

GGAATCGAGGAACCTCTCAGGGCTTTGCGTTGGGACGCTGACACACTGCATTGGTACTTTCTAGACTGTGAGCAGG

MS1-16

GGAATCGAGGAACCTCTCAGGGCTTCGTGTTGGGACGCTGACACACTGCGTTAGTACTTTCTAGACTGTGAGCAGA

MS1-17

GGAATCGAGGAACCTCTCAGGGCTTTGTGTTGGGACGCTGACACACTGCATTAGTACTTTCTAGACTGTGAGTAGG

MS1-18

GGAATCGAGGAACCTCTCAGGGCTTTGCGTTGGGACGCTGAACACCTGCATTAGTACTTTCTAAACTGTGAGCAAA

MS1-19

GGAATCGAGGAACCTCTCAGGGCTTTGTGTTGGGAACCTGAATCCCTGCATTAGAACTTTCCAAACTGGGAACAGG

MS1-20

GGAATCGAGGAACCTTTCAGGGCTTTTGGTTGGGAACCTGACCTCCCGGCATTAAAACTTTTCAAAACTGGGAACA

MS1-TRs

Composition of repeats unit in each minisatellites

MS1-13TR

1–2–3–4–4–5–6–5–4–7–6–6–Δ

MS1-14TR

1–2–3–4–4–8–6–6–5–4–7–6–9–Δ

MS1-15TR

1–2–3–10–11–7–6–6–12–5–4–7–6–13–Δ

MS1-16TR

1–2–14–15–4–4–16–6–6–6–17–4–18–19–20–Δ

  1. Δ: 0.6–0.9 repeat