Table 2 CD versus Controls DEncRNAs
From: Profiling non-coding RNA levels with clinical classifiers in pediatric Crohn’s disease
Name | Ileum Log2FC | Rectum Log2FC | Ileum P value | Rectum P value | Significant |
|---|---|---|---|---|---|
AC007228.9 | 1.296 | 1.457 | 1.24E−28 | 1.84E−26 | Both |
AC159540.1 | 1.001 | 1.095 | 3.80E−21 | 1.82E−24 | Both |
BCYRN1 | − 1.068 | − 0.691 | 7.34E−13 | 7.82E−06 | Both |
FAM225A | 2.541 | 1.498 | 9.97E−41 | 1.41E−15 | Both |
MIR1244-2 | 1.374 | 1.058 | 1.95E−61 | 1.30E−30 | Both |
MIR1244-3 | 1.626 | 1.343 | 3.34E−58 | 1.81E−30 | Both |
MIR1244-4 | 1.586 | 1.199 | 1.15E−48 | 1.05E−27 | Both |
OVCH1-AS1 | 1.553 | 1.399 | 4.51E−71 | 9.01E−47 | Both |
RF00019 | − 1.22 | − 0.677 | 2.44E−17 | 6.35E−08 | Both |
RN7SL2 | − 1.564 | − 1.371 | 3.01E−47 | 1.81E−33 | Both |
RP11-143J24.1 | 1.863 | 1.625 | 1.59E−58 | 7.05E−38 | Both |
RP11-184E9.1 | 1.876 | 1.681 | 7.55E−51 | 5.40E−33 | Both |
RP11-566K8.2 | − 1.096 | − 0.521 | 9.39E−14 | 6.58E−07 | Both |
RP11-734K23.9 | 1.459 | 1.391 | 6.63E−34 | 1.67E−29 | Both |
RP11-79H23.3 | 1.16 | 1.503 | 4.32E−13 | 3.61E−14 | Both |
RP11-88H9.2 | 1.024 | 1.311 | 2.07E−12 | 1.95E−09 | Both |
RP11-90D4.2 | 1.63 | 1.036 | 5.87E−18 | 5.75E−11 | Both |
RN7SKP22 | − 1.146 | 0.61 | 2.31E−11 | 3.17E−01 | Both |
AC007126.1 | − 1.543 | 0.347 | 6.61E−17 | 4.94E−01 | Ileal |
AC016735.2 | 2.725 | 0.911 | 1.16E−15 | 6.08E−03 | Ileal |
AC017002.1 | 1.372 | 1.105 | 1.51E−22 | 6.09E−08 | Ileal |
AC023590.1 | − 1.1 | − 0.38 | 2.15E−13 | 1.12E−02 | Ileal |
AC068491.1 | 1.227 | 0.716 | 2.08E−25 | 1.39E−09 | Ileal |
AC114730.3 | 1.214 | 0.029 | 1.27E−05 | 7.37E−01 | Ileal |
AC133644.2 | 1.437 | 0.882 | 4.32E−29 | 5.63E−08 | Ileal |
AFAP1-AS1 | 1.036 | 0.55 | 7.10E−05 | 5.06E−04 | Ileal |
AP001046.5 | 1.392 | 0.863 | 5.35E−20 | 1.25E−07 | Ileal |
B3GALT5-AS1 | 1.123 | − 0.39 | 4.89E−05 | 1.51E−02 | Ileal |
BLACAT1 | 1.007 | 0.549 | 9.38E−15 | 7.79E−04 | Ileal |
C12orf36 | 2.123 | − 0.294 | 9.81E−14 | 2.86E−02 | Ileal |
C12orf61 | 1.062 | 0.495 | 9.32E−17 | 4.10E−06 | Ileal |
CDKN2B-AS1 | − 1.023 | − 0.071 | 1.28E−07 | 6.17E−01 | Ileal |
CTA-384D8.36 | 1.158 | 0.584 | 6.26E−19 | 1.15E−06 | Ileal |
CTB-127C13.1 | − 1.135 | 1.492 | 2.87E−10 | 1.76E−03 | Ileal |
CTB-43E15.3 | 1.644 | 0.979 | 2.23E−13 | 3.68E−05 | Ileal |
CTB-61M7.2 | 4.619 | 2.916 | 2.63E−26 | 4.20E−10 | Ileal |
CTC-210G5.1 | − 1.106 | 0.74 | 9.33E−09 | 5.42E−02 | Ileal |
CTC-490G23.2 | 3.255 | − 0.056 | 5.64E−13 | 7.97E−01 | Ileal |
CTC-558O2.1 | − 1.068 | − 0.303 | 1.73E−11 | 3.84E−03 | Ileal |
CYTOR | 1.512 | 0.979 | 1.57E−33 | 2.22E−17 | Ileal |
FAM225B | 2.054 | 1.277 | 1.59E−28 | 1.75E−13 | Ileal |
HOTTIP | 2.857 | − 0.206 | 9.01E−08 | 1.80E−02 | Ileal |
HOXA11-AS1 | 2.247 | − 0.056 | 1.06E−11 | 4.95E−01 | Ileal |
LINC00346 | 1.549 | 0.269 | 1.22E−20 | 3.39E−02 | Ileal |
LINC00479 | − 1.255 | − 0.295 | 2.71E−11 | 2.26E−01 | Ileal |
LINC01127 | 2.775 | 1.017 | 3.05E−25 | 7.24E−06 | Ileal |
LINC01272 | 2.847 | 0.756 | 2.02E−27 | 3.48E−05 | Ileal |
LINC01595 | − 1.45 | − 0.295 | 3.53E−06 | 4.40E−01 | Ileal |
MAP3K20-AS1 | 3.232 | 0.226 | 4.36E−24 | 2.03E−01 | Ileal |
NCRNA00114 | 1.273 | 0.73 | 6.18E−15 | 2.41E−05 | Ileal |
RN7SKP22 | − 1.146 | 0.61 | 2.31E−11 | 3.17E−01 | Ileal |
RP11-109E12.1 | 1.913 | 1.492 | 2.76E−38 | 2.34E−28 | Ileal |
RP11-115D19.1 | 2.375 | 1.497 | 1.35E−18 | 3.75E−06 | Ileal |
RP11-116O18.1 | − 2.224 | 1.449 | 4.06E−24 | 1.00E−03 | Ileal |
RP11-1334A24.6 | 1.019 | 0.835 | 2.80E−11 | 8.02E−08 | Ileal |
RP11-138C24.1 | 3.41 | 1.76 | 4.40E−17 | 1.41E−04 | Ileal |
RP11-1399P15.1 | 1.451 | 0.609 | 1.21E−17 | 1.92E−06 | Ileal |
RP11-178A10.1 | 1.832 | 0.461 | 6.06E−15 | 1.04E−02 | Ileal |
RP11-17H4.2 | 1.652 | 0.601 | 1.46E−19 | 7.40E−05 | Ileal |
RP11-203B7.2 | − 1.435 | − 0.392 | 7.11E−10 | 1.48E−01 | Ileal |
RP11-208N14.5 | 2.608 | 0.084 | 6.35E−17 | 5.53E−01 | Ileal |
RP11-213H15.3 | 3.262 | 1.333 | 3.58E−20 | 1.09E−04 | Ileal |
RP11-21C4.1 | 1.405 | 0.379 | 8.97E−15 | 3.49E−02 | Ileal |
RP11-304L19.3 | 1.042 | 0.476 | 2.03E−19 | 2.27E−07 | Ileal |
RP11-354P11.4 | − 1.425 | 0.451 | 3.51E−15 | 3.90E−01 | Ileal |
RP11-380P13.1 | − 1.079 | − 0.411 | 4.27E−08 | 2.59E−02 | Ileal |
RP11-418I22.2 | − 1.246 | − 0.108 | 5.65E−11 | 6.75E−01 | Ileal |
RP11-419K12.2 | 1.874 | 0.697 | 2.15E−10 | 1.40E−02 | Ileal |
RP11-44K6.2 | 1.547 | 2.142 | 2.10E−12 | 2.91E−09 | Ileal |
RP11-478K15.6 | − 1.52 | − 0.382 | 7.82E−20 | 1.68E−02 | Ileal |
RP11-492E3.2 | 1.343 | 0.464 | 1.52E−17 | 5.09E−05 | Ileal |
RP11-515O17.2 | − 1.001 | − 0.028 | 4.70E−06 | 9.50E−01 | Ileal |
RP11-536O18.2 | 2.877 | 0.94 | 9.07E−24 | 1.90E−05 | Ileal |
RP11-638I2.9 | 1.214 | 0.598 | 9.50E−13 | 4.80E−04 | Ileal |
RP11-701P16.5 | 4.053 | 2.009 | 1.03E−20 | 2.54E−08 | Ileal |
RP11-806H10.4 | 1.168 | 0.851 | 3.83E−11 | 2.29E−06 | Ileal |
RP11-806L2.3 | 1.188 | 0.946 | 8.13E−19 | 2.35E−11 | Ileal |
RP11-817J15.3 | − 1.166 | 0.673 | 1.32E−04 | 2.92E−02 | Ileal |
RP11-875H7.4 | 1.538 | 0.153 | 6.28E−18 | 2.30E−01 | Ileal |
RP11-94C24.13 | − 1.125 | − 0.369 | 4.25E−15 | 6.62E−03 | Ileal |
RP11-96M12.1 | − 1.407 | 0.765 | 6.75E−10 | 7.57E−02 | Ileal |
RP13-497K6.1 | − 1.08 | − 0.408 | 1.97E−08 | 2.72E−02 | Ileal |
RP3-368B9.2 | − 1.153 | 0.178 | 2.21E−07 | 6.30E−01 | Ileal |
RP4-724E13.2 | − 1.297 | − 0.66 | 1.26E−21 | 7.49E−08 | Ileal |
RP5-899E9.1 | 1.52 | 0.498 | 6.13E−23 | 2.26E−04 | Ileal |
SATB2-AS1 | 1.165 | − 0.203 | 7.02E−07 | 2.12E−02 | Ileal |
SH3PXD2A-AS1 | 1.383 | 0.293 | 1.89E−11 | 2.30E−02 | Ileal |
SNHG9 | 1.229 | 0.959 | 8.91E−39 | 8.48E−18 | Ileal |
UCA1 | 1.151 | 0.296 | 1.51E−07 | 1.76E−01 | Ileal |
XXyac-YM21GA2.7 | − 1.373 | − 0.197 | 4.11E−12 | 3.64E−01 | Ileal |
RP11-116O18.1 | − 2.224 | 1.449 | 4.06E−24 | 1.00E−03 | Ileal |
AC007126.1 | − 1.543 | 0.347 | 6.61E−17 | 4.94E−01 | Ileal |
RP11-354P11.4 | − 1.425 | 0.451 | 3.51E−15 | 3.90E−01 | Ileal |
RP11-96M12.1 | − 1.407 | 0.765 | 6.75E−10 | 7.57E−02 | Ileal |
RP11-817J15.3 | − 1.166 | 0.673 | 1.32E−04 | 2.92E−02 | Ileal |
RP3-368B9.2 | − 1.153 | 0.178 | 2.21E−07 | 6.30E−01 | Ileal |
CTB-127C13.1 | − 1.135 | 1.492 | 2.87E−10 | 1.76E−03 | Ileal |
CTC-210G5.1 | − 1.106 | 0.74 | 9.33E−09 | 5.42E−02 | Ileal |
B3GALT5-AS1 | 1.123 | − 0.39 | 4.89E−05 | 1.51E−02 | Ileal |
SATB2-AS1 | 1.165 | − 0.203 | 7.02E−07 | 2.12E−02 | Ileal |
C12orf36 | 2.123 | − 0.294 | 9.81E−14 | 2.86E−02 | Ileal |
HOXA11-AS1 | 2.247 | − 0.056 | 1.06E−11 | 4.95E−01 | Ileal |
HOTTIP | 2.857 | − 0.206 | 9.01E−08 | 1.80E−02 | Ileal |
AC005392.1 | 3.255 | − 0.056 | 5.64E−13 | 7.97E−01 | Ileal |
AC066593.1 | 0.146 | − 0.545 | 5.63E−01 | 1.26E−03 | Rectal |
AC104135.4 | 0.894 | 1.445 | 7.86E−05 | 4.94E−07 | Rectal |
AP000345.1 | − 0.779 | − 0.765 | 5.37E−04 | 5.99E−04 | Rectal |
CTC-425O23.2 | − 0.853 | − 0.601 | 1.27E−13 | 4.39E−07 | Rectal |
CTD-2561J22.4 | − 0.974 | − 0.62 | 1.20E−11 | 2.92E−06 | Rectal |
DIO3OS | − 0.629 | − 0.531 | 3.40E−08 | 8.76E−05 | Rectal |
HOXD-AS2 | 1.377 | − 0.54 | 6.44E−09 | 1.51E−03 | Rectal |
LINC00923 | − 0.401 | − 0.553 | 7.70E−04 | 9.25E−06 | Rectal |
LL22NC03-2H8.5 | − 0.897 | − 0.692 | 9.65E−12 | 1.84E−11 | Rectal |
MIR145 | − 0.501 | − 0.612 | 3.12E−07 | 1.05E−06 | Rectal |
MIR3936 | − 0.811 | − 0.548 | 3.62E−16 | 1.42E−07 | Rectal |
MIR429 | − 0.617 | − 0.515 | 1.74E−07 | 1.06E−09 | Rectal |
RN7SKP127 | − 1.108 | − 0.656 | 1.07E−06 | 3.13E−04 | Rectal |
RN7SL3 | − 0.663 | − 0.875 | 4.39E−06 | 5.20E−08 | Rectal |
RP11-117B7.1 | 0.758 | 1.084 | 1.07E−19 | 1.41E−16 | Rectal |
RP11-125B21.2 | 0.268 | − 0.733 | 2.21E−01 | 2.00E−05 | Rectal |
RP11-13K12.5 | 0.152 | − 0.609 | 4.87E−01 | 1.95E−04 | Rectal |
RP11-283C24.1 | 1.872 | 1.69 | 1.26E−27 | 1.42E−19 | Rectal |
RP11-462G2.1 | 0.578 | 1.043 | 4.76E−04 | 5.23E−09 | Rectal |
RP11-527H14.2 | 0.834 | 1.34 | 3.74E−08 | 2.54E−09 | Rectal |
RP13-225O21.2 | − 0.876 | − 0.619 | 4.31E−14 | 2.75E−07 | Rectal |
RP13-516M14.10 | − 0.678 | − 0.531 | 2.53E−25 | 1.48E−14 | Rectal |
RP5-965G21.4 | 0.444 | − 0.516 | 8.04E−03 | 2.26E−08 | Rectal |
U62631.5 | − 0.901 | − 0.541 | 3.15E−06 | 3.35E−03 | Rectal |
HOXD-AS2 | 1.377 | − 0.54 | 6.44E−09 | 1.51E−03 | Rectal |