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Table 2 Features of 10 atypical A-T patients with compound heterozygous SNV and CNV in ATM

From: Compound heterozygous variants including a novel copy number variation in a child with atypical ataxia-telangiectasia: a case report

Patient

Sex

Age (year)

Phenotype (age, year)

Serum AFP

Pathogenic variants

Immunoglobulin levels (mg/dL)

References

Allele 1

Allele 2

Ig G

Ig A

Ig M

1

F

13

Ataxia (4) telangiectasia (1), cerebellar atrophy

325

Exon 22

c.3174G > A

Exon 63

Large genomic deletion

8800

1170

1070

Huang [18]

2

F

4

Start walking (1.5), movement abnormalities (1.5), normal brain MRI normal ophthalmologic exploration

214

Exon 47

c.6899G > C

Exon 17–61

g.(41245_49339)_

(137044_147250)dup

947

 < 5

87

Martin-Rodriguez [39]

3

F

6

Ataxia (1.4), telangiectasia (3)

↑

Exon 62, 63

Large genomic deletion

Exon 42

c.5932G > T

↓

↓

NA

Podralska [40]

4

NA

NA

Ataxia < 8, typical phenotype

NA

Exon 18–33

c.(2638 + 1_2639–1)_ (5005 + 1_5006–1)dup

NA

NA

↓

NA

Fiévet [37]

5

NA

NA

Ataxia > 8, Loss of walking ability > 15, Oculomotor apraxia > 15

NA

Exon 17–61

c.(2466 + 1_2467–1)_ (8850 + 1_8851–1)dup

NA

NA

N

NA

Fiévet [37]

6

F

2

Ataxia (0.7),

Absent presentation of telangiectasia, malignancy, respiratory disease, immunodeficiency

24

Exon 24

c.3576G > A; p.(Ser1135_Lys1192del58)

Exon NA

c.(-31 + 1674_46) _(2405_2541)del (deletion)

NA

NA

NA

van Os [41]

7

NA

NA

NA

NA

Exon 07–17 deleted

p.Arg111_Arg2191 > AsnfsX44

NA

NA

NA

NA

Micol [42]

8

NA

NA

NA

NA

Exon 08–15 deleted

p.Glu166_Glu708 > AspfsX29

NA

NA

NA

NA

Micol [42]

9

NA

NA

NA

NA

Exon 59–61 deleted

p.Val2758_Gly2891 > ValfsX46

NA

NA

NA

NA

Micol [42]

10

NA

NA

NA

NA

Exon 64–65 deleted

p.Val2951_X3057 > SerfsX29

NA

NA

NA

NA

Micol [42]

  1. MRI magnetic resonance imaging, N normal, NA not available, ↓ decreased (compared to age-related reference values), ↑ increased (compared to age-related reference values)