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Table 2 General information of selected SNPs and Hardy–Weinberg test

From: A missense variant rs2585405 in clock gene PER1 is associated with the increased risk of noise-induced hearing loss in a Chinese occupational population

Gene

SNP

Alleles

Chromosome

Functional Consequence

MAF databasea

P for HWEb

PER1

rs2253820

A/G

17:8144851

splice region variant

0.44

0.954

 

rs2585405

C/G

17:8143454

missense variant

0.23

0.441

PER2

rs56386336

A/G

2:238245307

3'prime UTR variant

0.09

1.000

 

rs934945

A/G

2:238246412

missense variant

0.17

0.026

CRY1

rs1056560

G/T

12:106991832

3'prime UTR variant

0.47

0.402

 

rs3809236

C/T

12:107093269

5'prime UTR variant

0.20

0.892

CRY2

rs2292910

C/A

11:45882062

3'prime UTR variant

0.42

0.994

 

rs6798

C/T

11:45882926

3'prime UTR variant

0.24

0.892

BDNF

rs11030099

A/C

11:27656036

3'prime UTR variant

0.23

0.205

 

rs7124442

C/T

11:27655494

3'prime UTR variant

0.33

0.654

 

rs6265

A/G

11:27658369

missense variant

0.20

0.264

NTF3

rs1805149

A/G

12:5494441

missense variant

0.12

0.592

  1. aData from NCBI dbSNP
  2. bP value of Hardy–Weinberg test