Gene | Chr | SNP | A1 | A2 | Region | MAF | Dominant model | Recessive model | Genotypic model | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Beta | SE | P | Beta | SE | P | Beta | SE | P | |||||||
GABRB3 | 15 | rs150101078 | A | G | Intron | 0.040 | 0.13 | 0.04 | 2.61 × 10−3 | 0.01 | 0.28 | 0.985 | 0.01 | 0.14 | 0.956 |
rs12438141 | T | C | Missense | 0.059 | 0.07 | 0.04 | 0.034 | − 0.02 | 0.19 | 0.927 | 0.00 | 0.10 | 0.962 | ||
rs79565260 | A | G | Intron | 0.178 | 0.03 | 0.02 | 0.230 | 0.06 | 0.06 | 0.365 | 0.03 | 0.03 | 0.310 | ||
rs149646336 | T | C | Intron | 0.027 | 0.00 | 0.05 | 0.939 | 0.15 | 0.43 | 0.728 | 0.07 | 0.21 | 0.728 | ||
rs74591460 | C | A | Intron | 0.099 | − 0.01 | 0.03 | 0.861 | 0.22 | 0.11 | 0.040 | 0.11 | 0.05 | 0.043 | ||
rs79465949 | T | C | Intron | 0.018 | 0.01 | 0.06 | 0.839 | 0.65 | 0.56 | 0.249 | 0.32 | 0.28 | 0.249 | ||
rs74004636 | T | G | Intron | 0.057 | − 0.01 | 0.04 | 0.850 | − 0.44 | 0.20 | 0.024 | − 0.22 | 0.10 | 0.024 | ||
rs79333046 | A | G | Intron | 0.213 | − 0.07 | 0.02 | 1.21 × 10−3 | − 0.07 | 0.06 | 0.207 | − 0.05 | 0.03 | 0.088 | ||
rs76635931 | G | T | Intron | 0.014 | 0.09 | 0.07 | 0.187 | − 1.08 | 1.13 | 0.335 | NA | NA | NA | ||
rs111863451 | G | T | Intron | 0.027 | − 0.02 | 0.05 | 0.685 | 0.80 | 0.40 | 0.045 | 0.40 | 0.20 | 0.046 | ||
rs145333058 | T | C | Intron | 0.015 | 0.02 | 0.07 | 0.716 | − 0.54 | 0.80 | 0.495 | − 0.27 | 0.40 | 0.495 | ||
rs146937293 | C | T | Intron | 0.043 | 0.01 | 0.04 | 0.770 | 0.09 | 0.23 | 0.709 | 0.04 | 0.12 | 0.707 | ||
rs77328500 | G | A | Intron | 0.077 | − 0.02 | 0.03 | 0.442 | 0.03 | 0.15 | 0.860 | 0.01 | 0.08 | 0.879 | ||
rs74653915 | C | T | Intron | 0.016 | − 0.11 | 0.06 | 0.103 | 0.02 | 0.80 | 0.980 | 0.01 | 0.40 | 0.984 | ||
GABRA5 | 15 | rs78575803 | A | G | Intron | 0.101 | 0.02 | 0.03 | 0.498 | 0.11 | 0.10 | 0.297 | 0.06 | 0.05 | 0.287 |
rs7165524 | T | C | Intron | 0.270 | − 0.02 | 0.02 | 0.311 | − 0.02 | 0.04 | 0.721 | − 0.01 | 0.02 | 0.573 | ||
rs80063633 | A | C | Intron | 0.151 | 0.00 | 0.02 | 0.949 | 0.15 | 0.07 | 0.045 | 0.07 | 0.04 | 0.049 | ||
rs140148185 | A | G | Intron | 0.090 | − 0.01 | 0.03 | 0.809 | 0.39 | 0.13 | 2.73 × 10−3 | 0.19 | 0.06 | 3.05 × 10−3 | ||
rs146013014 | G | A | Intron | 0.026 | 0.07 | 0.05 | 0.182 | 0.55 | 0.40 | 0.163 | 0.28 | 0.20 | 0.161 | ||
rs189790076 | C | G | Intron | 0.016 | 0.06 | 0.06 | 0.316 | 1.84 | 0.56 | 1.05 × 10−3 | 0.92 | 0.28 | 1.04 × 10−3 | ||
rs140319999 | T | C | Intron | 0.018 | 0.10 | 0.06 | 0.103 | − 0.17 | 0.80 | 0.827 | − 0.09 | 0.40 | 0.831 | ||
rs34560927 | T | C | Intron | 0.372 | 0.00 | 0.02 | 0.988 | 0.06 | 0.03 | 0.091 | 0.02 | 0.02 | 0.174 | ||
GABRG3 | 15 | rs34984550 | G | C | Intron | 0.024 | 0.00 | 0.05 | 0.941 | − 0.18 | 0.56 | 0.752 | − 0.09 | 0.28 | 0.752 |
rs140670 | A | T | Intron | 0.293 | 0.01 | 0.02 | 0.664 | − 0.03 | 0.04 | 0.455 | − 0.01 | 0.02 | 0.586 | ||
rs147619342 | T | C | Intron | 0.017 | − 0.08 | 0.06 | 0.208 | − 1.45 | 0.50 | 4.02 × 10−3 | − 0.72 | 0.25 | 3.97 × 10−3 | ||
rs12903002 | T | C | Intron | 0.088 | 0.02 | 0.03 | 0.490 | 0.01 | 0.13 | 0.921 | 0.01 | 0.07 | 0.901 | ||
rs1017364 | G | A | Intron | 0.266 | 0.03 | 0.02 | 0.217 | − 0.01 | 0.04 | 0.813 | 0.00 | 0.02 | 0.946 | ||
rs150722146 | A | G | Intron | 0.026 | − 0.05 | 0.05 | 0.282 | − 0.29 | 0.56 | 0.604 | − 0.15 | 0.28 | 0.601 | ||
rs138047237 | A | G | Intron | 0.013 | 0.06 | 0.07 | 0.384 | 1.30 | 0.80 | 0.103 | 0.65 | 0.40 | 0.103 | ||
rs734254 | A | G | Intron | 0.034 | − 0.11 | 0.05 | 0.018 | − 0.33 | 0.34 | 0.325 | − 0.17 | 0.17 | 0.316 | ||
rs12593313 | G | C | Intron | 0.022 | 0.00 | 0.06 | 0.989 | − 0.01 | 0.43 | 0.990 | 0.00 | 0.21 | 0.990 | ||
rs140853604 | T | C | Intron | 0.031 | − 0.01 | 0.05 | 0.789 | 0.32 | 0.37 | 0.387 | 0.16 | 0.19 | 0.389 | ||
rs7173587 | T | C | Intron | 0.157 | − 0.06 | 0.02 | 0.023 | 0.08 | 0.07 | 0.288 | 0.03 | 0.04 | 0.419 | ||
rs143682098 | G | A | Intron | 0.053 | − 0.02 | 0.04 | 0.679 | − 0.12 | 0.25 | 0.645 | − 0.06 | 0.13 | 0.641 | ||
rs17739682 | G | A | Intron | 0.072 | 0.02 | 0.03 | 0.620 | 0.12 | 0.17 | 0.489 | 0.06 | 0.08 | 0.483 | ||
rs144369966 | C | T | Intron | 0.018 | 0.06 | 0.06 | 0.316 | − 0.29 | 0.65 | 0.653 | − 0.14 | 0.32 | 0.656 | ||
rs67338000 | A | G | Intron | 0.449 | − 0.04 | 0.02 | 0.068 | 0.00 | 0.03 | 0.859 | − 0.01 | 0.02 | 0.401 | ||
rs8028000 | C | T | Intron | 0.014 | − 0.14 | 0.07 | 0.041 | − 1.64 | 0.80 | 0.039 | − 0.82 | 0.40 | 0.039 | ||
rs61507711 | T | C | Intron | 0.097 | 0.02 | 0.03 | 0.582 | 0.10 | 0.12 | 0.384 | 0.05 | 0.06 | 0.376 | ||
rs9302372 | A | G | Intron | 0.042 | 0.02 | 0.04 | 0.670 | − 0.08 | 0.23 | 0.740 | − 0.04 | 0.12 | 0.745 | ||
rs4555109 | T | G | Intron | 0.222 | 0.04 | 0.02 | 0.104 | 0.01 | 0.05 | 0.825 | 0.01 | 0.03 | 0.624 | ||
rs149403614 | A | G | Intron | 0.035 | 0.00 | 0.04 | 0.994 | 0.05 | 0.40 | 0.894 | 0.03 | 0.20 | 0.894 | ||
rs28399529 | G | A | 3′ UTR | 0.022 | 0.00 | 0.06 | 0.965 | − 0.25 | 0.65 | 0.705 | − 0.12 | 0.33 | 0.705 |