HPV16 E2 nucleotide variation | |||||||
---|---|---|---|---|---|---|---|
Variant site | AA | As | Af | Number of variation samples | Variation frequency | Amino acid change | Structural domain |
(n = 91) | (%) | ||||||
C1901T | C | C | C | 1 | 1.10 | L4F | transcriptional activation domain |
G1964A | G | A | G | 27 | 29.67 | D25N | |
A2074G | A | A | A | 2 | 2.20 | T61T | |
A2091C | A | A | A | 1 | 1.10 | N67T | |
G2129A | G | G | G | 2 | 2.20 | E80K | |
G2204A | G | G | G | 5 | 5.49 | A105T | |
C2295A | A | A | A | 34 | 37.36 | T135K | |
G2315A | G | G | G | 1 | 1.10 | E142D | |
T2341C | T | T | T | 2 | 2.20 | G150G | |
G2369T | G | G | G | 1 | 1.10 | V160F | |
G2385A | A | A | A | 29 | 31.87 | R165Q | |
T2410G | T | T | T | 13 | 14.29 | D173E | |
G2504A | G | G | G | 1 | 1.10 | V205I | Hinge region |
C2511T | C | C | C | 1 | 1.10 | S207F | |
T2520C | T | C | T | 22 | 24.18 | I210T | |
C2546T/A | T | T | T | 70 | 76.92 | P219S/T | |
G2585A | A | A | A | 19 | 20.88 | E232K | |
A2587C | A | A | A | 1 | 1.10 | E232K | |
T2660C | T | C | T | 17 | 18.68 | L257L | |
T2703G | T | T | T | 1 | 1.10 | F271V | |
C2820A | A | A | A | 25 | 27.47 | T310K | DNA binding domain |
C2923A | A | A | A | 4 | 4.40 | D344E | |
C2934T | C | C | C | 1 | 1.10 | S348F | |
T2956C | T | T | T | 1 | 1.10 | T355T | |
T2983C | T | T | T | 9 | 9.89 | S364S |