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Fig. 1 | BMC Medical Genomics

Fig. 1

From: Transcriptome sequencing reveals a lncRNA–mRNA interaction network in extramammary Paget’s disease

Fig. 1

A, B The differences in mRNAs and lncRNAs produced by the comparison are reflected in the MA plots. The x‐axis is the mean of normalized counts of all samples’ expression, and the y‐axis is the log2 fold-change. The red plots are marked by significantly different genes. C, D Differential expression analyses of mRNA and lncRNA between cases versus controls. The expression level for each gene was included in the volcano plot. Red and green points indicate the differentially expressed genes (DEGs). Gray and blue points indicated the non‐DEGs. The Y‐axis contains the log10 p value of the genes' mean expression level modified by the DEseq package, and the x‐axis indicates the log2 of the fold changes among two libraries. E, F Hierarchical clustering results

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