Fig. 2
From: A genomic mutation spectrum of collecting duct carcinoma in the Chinese population
The landscape of copy number variants (CNVs). A Left: Significant (q < 0.25) recurrent focal amplified CNVs detected by Control-FREEC along all autosomes using GISTIC 2.0 are shown. Recurrent putative cancer driver genes of each SCNA are also highlighted. Right: Significant (q < 0.25) recurrent focal deleted CNVs detected by Control-FREEC along all autosomes using GISTIC 2.0 are shown. Recurrent putative cancer driver genes of each SCNA are also highlighted. B Venn diagram of the four included cohorts using the CNV-based deleted genes. C Rcircos results of the four included cohorts using the CNV-based deleted genes. KIRC, clear cell renal cell carcinoma; KIRP, papillary renal cell carcinoma; BLCA, bladder carcinoma; CDC, collecting duct carcinoma