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Table 6 Haplotype frequencies of PNPLA3 polymorphisms and their association with HCC susceptibility

From: Contribution of PNPLA3 gene polymorphisms to hepatocellular carcinoma susceptibility in the Chinese Han population

SNP-ID

Haplotype

Fre-HCC

Fre-control

OR (95% CI)

p

FDR-p

rs738409-rs3747207-rs4823173-rs2896019

CGGT

0.564

0.613

1

  

GAAG

0.406

0.360

1.25(1.03–1.53)

0.023

0.046

  1. HCC hepatocellular carcinoma; SNP single nucleotide polymorphism; Fre frequency; OR odds ratio; 95% CI 95% confidence interval; FDR false discovery rate
  2. Adjusted OR (95% CI) was calculated by logistic regression analysis
  3. Bold values indicate statistical significance