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Table 2 "Global functional analysis" conducted using Ingenuity Pathway Analysis.

From: Increased cell motility and invasion upon knockdown of lipolysis stimulated lipoprotein receptor (LSR) in SW780 bladder cancer cells

Time after transfection

siRNA

Category

Process Annotation

Significance

18 h

TP53

Cell Death

cell death of tumor cell lines

5.96E-09

  

Organismal Survival

survival of mammalia

9.59E-09

  

Cell Death

cell death of lung cancer cell lines

3.72E-08

  

Organismal Survival

survival of mice

9.84E-08

  

Cellular Growth and Proliferation

colony formation of eukaryotic cells

1.48E-07

 

LSR1

Cancer

proliferation of tumor cell lines

3.78E-07

  

DNA Replication, Recombination, and Repair

synthesis of DNA

4.61E-07

  

Cell Death

apoptosis of cell lines

1.67E-06

  

Cancer

cell death of tumor cell lines

1.95E-06

  

Organismal Survival

survival of mammalia

2.29E-06

 

LSR2

Cancer

growth of tumor cell lines

2.11E-07

  

Cellular Growth and Proliferation

growth of cell lines

3.14E-07

  

Cancer

proliferation of tumor cell lines

1.38E-06

  

Cardiovascular System Development and Function

development of blood vessel

1.78E-06

  

Cellular Growth and Proliferation

growth of eukaryotic cells

2.85E-06

 

TP53+LSR1

Cellular Growth and Proliferation

colony formation of eukaryotic cells

5.07E-10

  

Organismal Survival

survival of mammalia

8.79E-09

  

Cellular Growth and Proliferation

colony formation of cell lines

1.11E-08

  

Cell Death

cell death of cell lines

3.66E-08

  

Cancer

colony formation of tumor cell lines

1.11E-07

48 h

TP53

Cell-To-Cell Signaling and Interaction

activation of eukaryotic cells

1.17E-10

  

Organismal Survival

survival of rodents

1.74E-09

  

Cellular Growth and Proliferation

proliferation of cell lines

1.29E-08

  

Cellular Growth and Proliferation

growth of central nervous system cells

1.76E-08

  

Cellular Growth and Proliferation

colony formation of cells

3.72E-08

 

LSR1

Cellular Movement

cell movement

3.26E-12

  

Cellular Movement

invasion of eukaryotic cells

2.31E-11

  

Cellular Movement

invasion of cell lines

1.61E-09

  

Cellular Movement

cell movement of cell lines

3.84E-09

  

Cellular Movement

cell movement of endothelial cells

4.24E-09

 

LSR2

Cellular Movement

cell movement

2.72E-15

  

Cellular Growth and Proliferation

growth of tumor cell lines

4.45E-12

  

Cellular Movement

cell movement of eukaryotic cells

4.54E-12

  

Cell-To-Cell Signaling and Interaction

adhesion of cells

4.78E-12

  

Cellular Movement

cell movement of cell lines

7.54E-12

 

TP53+LSR1

Renal and Urological Disease

renal and urological disorder of rodents

3.87E-08

  

Renal and Urological Disease

renal and urological disorder of rats

1.05E-07

  

Cancer

growth of tumor cell lines

1.99E-07

  

Cellular Growth and Proliferation

colony formation of eukaryotic cells

5.94E-07

  

Cellular Growth and Proliferation

colony formation of cell lines

1.18E-06

72 h

TP53

Tissue Development

development of tissue

5.91E-08

  

Tissue Development

angiogenesis of chorioallantoic membrane

8.76E-08

  

Renal and Urological Disease

renal and urological disorder of rodents

1.01E-07

  

Cancer

angiogenesis of tumor

1.82E-07

  

Cellular Movement

cell movement

1.99E-07

 

LSR1

Cellular Movement

cell movement

8.99E-11

  

Cellular Movement

migration of eukaryotic cells

2.41E-09

  

Cellular Movement

cell movement of eukaryotic cells

2.46E-09

  

Cellular Movement

cell movement of cell lines

5.27E-09

  

Cellular Movement

migration of tumor cell lines

1.72E-08

 

LSR2

Cellular Movement

cell movement

5.60E-15

  

Cellular Movement

cell movement of eukaryotic cells

2.46E-13

  

Cellular Movement

migration of eukaryotic cells

7.57E-13

  

Cellular Growth and Proliferation

growth of tumor cell lines

5.66E-12

  

Tissue Development

formation of tissue

8.77E-12

 

TP53+LSR1

Cellular Movement

migration of eukaryotic cells

4.19E-10

  

Cellular Movement

cell movement

8.74E-10

  

Cellular Movement

cell movement of eukaryotic cells

1.57E-09

  

Cancer

angiogenesis of tumor

6.86E-09

  

Renal and Urological Disease

renal and urological disorder of rodents

8.15E-09

  1. The list includes the annotation of the differentially expressed genes upon knockdown. The likelihood that the association between a set of differentially expressed genes and a given function was due to chance was calculated using the right-tailed Fisher's exact test. The biological functions or processes annotated to affected genes are listed according to their significance.