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Table 3 Biological Context

From: Host sequence motifs shared by HIV predict response to antiretroviral therapy

Category Term Count % p-value
GO BP Level 5 GO:0016310~phosphorylation 13 39.39% 5.21E-8
GO BP Level 5 GO:0008219~cell death 10 30.30% 7.86E-5
GO BP Level 5 GO:0006260~DNA replication 6 18.18% 9.30E-5
GO BP Level 5 GO:0006915~apoptosis 9 27.27% 3.16E-4
GO BP Level 5 GO:0006935~chemotaxis 5 15.15% 4.02E-4
GO MF Level 5 GO:0004697~protein kinase C activity 7 21.21% 1.22E-12
GO MF Level 5 GO:0004672~protein kinase activity 11 33.33% 1.75E-6
GO MF Level 5 GO:0032559~adenyl ribonucleotide binding 15 45.45% 1.97E-6
GO MF Level 5 GO:0003697~single-stranded DNA binding 5 15.15% 6.65E-6
GO MF Level 5 GO:0004707~MAP kinase activity 2 6.06% 0.0395
KEGG PATHWAY hsa04650:Natural killer cell mediated cytotoxicity 10 30.30% 8.77E-9
KEGG PATHWAY hsa04664:Fc epsilon RI signaling pathway 8 24.24% 1.30E-7
KEGG PATHWAY hsa04530:Tight junction 9 27.27% 3.36E-7
KEGG PATHWAY hsa04370:VEGF signaling pathway 7 21.21% 1.05E-6
KEGG PATHWAY hsa04912:GnRH signaling pathway 6 18.18% 1.24E-4
KEGG PATHWAY hsa05223:Non-small cell lung cancer 5 15.15% 1.34E-4
  1. Gene Ontology categories (level 5) and KEGG pathways associated with the host proteins listed in Table 2. Count refers to the number of proteins from Table 2 which have the associated term. P-values were determined using the DAVID enrichment tool using the set of all human proteins with the ELMs in Table 2 as a background set.