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Table 3 QPCR results of genes selected for the second verifiaction round

From: Verification of genes differentially expressed in neuroblastoma tumours: a study of potential tumour suppressor genes

Gene Selection criteria FC Ver 1 t-test Ver 1 FC Ver 2 t-test Ver 2
ATBF1 p-value 9 1.70E-05 2.7 0.032
CACNA2D3 FC 133 0.0019 5.1 0.049
CNTNAP2 FC 287 0.0011 5.1 0.0036
DCUN1D2 FC 26 0.0027 1.0 0.46
DPYSL3 FC 23 0.01 1.6 0.19
FUSIP1 LOH 22 0.013 2.0 0.013
GNB1 PR 10 0.0028 2.3 0.007
POU4F2 PR; FC 1518 0.011 3.7 0.15
RAPGEF6 PR 37 0.0097 1.2 0.36
SLC35E2 PR 3 0.024 3.5 0.011
SLC6A2 FC 540 0.0012 2.8 0.11
TFAP2B PR 13 0.012 4.5 0.0049
  1. Column 2: p-value = Most significant in Ver 1 and cancer involvement, FC = Top ten with highest fold change (FC), LOH = Localized in a common Loss of Heterozygosity (LOH) region, PR = Previously Reported in NB microarray expression studies; column 3–4: Ver 1 = verification group 1; column 5–6: Ver 2 = verification group 2;