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Table 1 Primer nucleotide sequences used in RT-qPCR assays for genes described in the study.

From: Transcriptional profiling differences for articular cartilage and repair tissue in equine joint surface lesions

Gene Name

Gene Symbol

Forward Primer

Reverse Primer

Beta-2-microglobulin

B2M

5-CGGGCTACTCTCCCTGACT-3

5-GTGACGTGAGTAAACCTGAACCTT-3

Ribosomal protein, large, P0

RPLP0

5-CTGATTACACCTTCCCACTTGCT-3

5-AGCCACAAATGCAGATGGATCA-3

Procollagen, type I, alpha 2

COL1A2

5-TGAGACTTAGCCACCCAGAGT-3

5-GCATCCATAGTGCATCCTTGATTAGG-3

Procollagen, type II, alpha 1

COL2A1

5-CTGGCTTCAAAGGCGAACAAG-3

5-GCACCTCTTTTGCCTTCTTCAC-3

Cartilage oligomeric matrix protein

COMP

5-CGAGCCCGGCATCCA-3

5-CCCAGGGCCTGTGGAG-3

Dermatopontin

DPT

5-GGAGATCAACAGGGCTGGAAT-3

5-CCGCCACCAGTCCATTGTT-3

Fibroblast activation protein

FAP

5-AGACTATCTTCTCATCCACGGAACA-3

5-CCGGATATGCCGTGGTTCTG-3

Tenascin-C

TNC

5-TCAGCCATCACTACCAAGTTCAC-3

5-GAACCTCAGTAGCAGTCAAATCTCT-3