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Table 2 Differentially expressed genes after 5 min (Ca5), 20 min (Ca20) and 30 min (ca30) of untreated CA

From: Effect of methylene blue on the genomic response to reperfusion injury induced by cardiac arrest and cardiopulmonary resuscitation in porcine brain

Regulation

Known Function

Probe Set

Gene Products

Fold change

    

Ca5

Ca20

Ca30

Up

Transcription

Ssc.9200.1.A1_at

similar to ZCCHC12, Zinc finger CCHC domain-containing protein 12

1.3

2.1*

1.3

 

Transcription

Ssc.2132.1.S1_a_at

similar to RPS6KA5 ribosomal protein S6 kinase alpha-5

0.8

2.3*

1.0

 

Transcription

Ssc.22527.1.A1_at

similar to homeobox protein PBX3, Pre-B-cell leukemia transcription factor 3.

0.9

2.5*

1.3

 

Signal transduction

Ssc.14404.1.A1_at

HTR2C, 5-hydroxytryptamine (serotonin) receptor 2C

1.1

4.6*

1.5

 

Transport

Ssc.640.1.S1_at

TTR, Transthyretin (Prealbumin)

27

2789*

2.6

 

Cation transport

Ssc.3850.1.S1_at

similar to NNAT, neuronatin

1.4

1.9*

1.4

 

Potassium transport

Ssc.6932.1.A1_at

similar to DPP10, inactive dipeptidyl peptidase 10

1.3

1.1

1.5*

 

Zinc transport

Ssc.7040.1.A1_at

similar to SLC30A9, solute carrier family 30 member 9

1.4

1.1

1.5*

 

Zinc transport

Ssc.17849.1.A1_at

similar to SLC30A10, solute carrier family 30 member 10

4.0*

4.5*

4.7*

 

Calcium-mediated signalling

Ssc.29371.1.A1_at

similar to GNAL guanine nucleotide-binding protein G(olf) subunit alpha

1.6

16.5*

1.1

 

Calcium-mediated signalling

Ssc.19549.1.S1_at

similar to NECAB1, Neuronal calcium-binding protein 1

1.5

1.0

2.0*

 

Calcium-mediated signalling

Ssc.3649.1.A1_at

similar to RCAN3 regulator of calcineurin 3 (calcipressin-3)

1.1

1.5*

1.0

 

Opioid peptide

Ssc.121.1.S1_at

PDYN, Beta-neoendorphin-dynorphin

6.2

14.2*

1.4

 

Stress response

Ssc.7903.1.A1_at

similar to HSPA13, Heat shock 70 kDa protein 13 (stress 70 protein chaperone microsome-associated 60 kDa protein)

1.3

0.9

2.0*

 

Neurogenesis

Ssc.19425.1.A1_at

similar to MAPT, microtubule-associated protein tau

1.7*

1.0

1.2

 

Nucleic acid metabolism

Ssc.6238.2.S1_at

similar to AK3, GTP:AMP phosphotransferase mitochondrial (adenylate kinase 3)

1.3

1.1

1.7*

 

Not determined

Ssc.12504.1.A1_at

similar to protein FAM14A

0.9

2.0*

0.9

 

Not determined

Ssc.30063.1.A1_at

unknown

2.4*

1.0

1.0

 

Not determined

Ssc.29510.1.A1_at

unknown

1.6

1.4

2.1*

 

Not determined

Ssc.21096.1.S1_at

unknown

1.3

3.6*

4.5*

 

Not determined

Ssc.31095.1.A1_at

unknown

1.3

2.0*

0.9

Down

Transcription

Ssc.19152.1.S1_at

similar to CPSF7, cleavage and polyadenylation specificity factor 7

0.8

0.8

0.6*

 

Signal transduction

Ssc.13752.1.S1_at

similar to PIK3R1, phosphatidylinositol 3-kinase p85 regulatory subunit alpha

0.7

0.3*

0.8

 

Signal transduction

Ssc.11787.1.S1_at

similar to RASSF2, Ras association domain-containing protein 2

0.9

0.6*

0.8

 

Proteolysis

Ssc.3063.1.S1_at

similar to PITRM1, pitrilysin metalloproteinase 1

0.6*

0.6*

0.9

 

Glucose metabolism

Ssc.19476.2.A1_s_at

PYGM, Glycogen phosphorylase

0.7

0.8

0.6*

 

Immune response

Ssc.13778.1.S1_at

IgG, Immunoglobulin G, heavy chain

0.5

0.8

0.1*

 

Not determined

Ssc.17442.1.S1_at

unknown

0.9

0.6*

0.6*