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Table 1 Databases integrated within Genotator (Statistics Gathered: June 19, 2010)

From: Genotator: A disease-agnostic tool for genetic annotation of disease

Database

Website

Description

Statistics

GeneCards [3]

[17]

Searchable database of human genes that provides concise genomic, genetic and functional information

73,017 Entries, 28,656 of them with symbols approved by the HUGO gene nomenclature committee

Genetic Association Database [8]

[18]

Archive of human genetic association studies of complex diseases and disorders

2673 genes for 5636 diseases/phenotypes

HuGE Navigator [7]

[19]

Knowledge base including information on gene-disease and gene-gene associations

9429 genes for 2215 diseases

Human Gene Mutation Database [2]

[20]

Database established for the study of mutational mechanisms in human genes

72414 mutations in public release

Online Mendelian Inheritance in Man [1]

[21]

NCBI's compendium of human genes and genetic phenotypes

13, 158 genes for 2799 phenotypes/diseases

Your Favorite Gene

[22]

Database containing scientific descriptions and overviews of genes and their corresponding proteins with links to the most used gene data-banks

~ 8595 genes

UniProt [23]

[24]

Central database of protein sequences with accurate, consistent, rich sequence and functional annotation

UniProtKB/Swiss-Prot Release 2010_06 of 18-May-10 of contains 517100 sequence entries

   

UniProtKB/TrEMBL Release 2010_07 of 15-Jun-2010 of contains 11109684 sequence entries

PharmGKB [25]

[26]

Database of primary genotype and phenotype data, annotate gene variants and gene-drug-disease relationships

3,197 diseases, 26,216 genes

Entrez Gene

[27]

Searchable database of genes, from RefSeq genomes, and defined by sequence and/or located in the NCBI Map Viewer

42644 genes

WikiGenes [28]

[29]

Non-profit, open access database of articles on genes, proteins and chemical compounds

Global community

GenAtlas [30]

[31]

Database containing relevant information with respect to gene mapping and genetic diseases

22466 genes/4434 phenotypes