Table 2 Selected atherosclerosis related genes for model derivation.
From: Molecular prediction for atherogenic risks across different cell types of leukocytes
Probes | Gene_Symbol | Pvalue | Qvalue | Fold change | Predictor for test set | Function |
|---|---|---|---|---|---|---|
211921_x_at | PTMA | 8.88E-08 | 5.79E-04 | 1.47 | MO/MA | Inflammatory Disease |
206788_s_at | CBFB | 2.87E-07 | 7.32E-04 | -1.50 | MO/MA | Inflammatory Response |
207760_s_at | NCOR2 | 2.49E-07 | 7.32E-04 | 1.25 | MA | Other Metabolic Processes |
218828_at | PLSCR3 | 2.05E-07 | 7.32E-04 | 1.27 | MO/WBC | Other Metabolic Processes |
201331_s_at | STAT6 | 2.74E-06 | 2.18E-03 | 1.32 | MO | Inflammatory Response |
201591_s_at | NISCH | 2.55E-06 | 2.18E-03 | 1.28 | MO/WBC | Other Metabolic Processes |
205125_at | PLCD1 | 2.19E-06 | 2.18E-03 | 1.22 | MO | Other Metabolic Processes |
202102_s_at | BRD4 | 3.25E-06 | 2.39E-03 | 1.41 | MO/WBC | Other Metabolic Processes |
205059_s_at | IDUA | 3.94E-06 | 2.44E-03 | 1.38 | MO/MA | Other Metabolic Processes |
212705_x_at | PNPLA2 | 4.25E-06 | 2.56E-03 | 1.36 | MO/MA | Lipid Metabolism |
203839_s_at | TNK2 | 4.95E-06 | 2.88E-03 | 1.37 | MO/MA | Other Metabolic Processes |
210969_at | PKN2 | 5.25E-06 | 2.95E-03 | -1.55 | MO | Other Metabolic Processes |
207292_s_at | MAPK7 | 5.67E-06 | 2.97E-03 | 1.23 | MO | Other Metabolic Processes |
211716_x_at | ARHGDIA | 5.74E-06 | 2.97E-03 | 1.43 | MO | Inflammatory Disease |
206580_s_at | EFEMP2 | 6.76E-06 | 3.24E-03 | 1.35 | MO | Inflammatory Disease |
202389_s_at | HTT | 7.10E-06 | 3.25E-03 | 1.17 | WBC | Lipid Metabolism |
218961_s_at | PNKP | 7.00E-06 | 3.25E-03 | 1.22 | MO | Other Metabolic Processes |
1555214_a_at | CLEC7A | 7.61E-06 | 3.44E-03 | -1.89 | MO | Inflammatory Response |
220088_at | C5AR1 | 8.96E-06 | 3.56E-03 | 1.32 | MO | Inflammatory Response |
204506_at | PPP3R1 /WDR92 | 1.01E-05 | 3.87E-03 | -1.51 | MO/MA | Other Metabolic Processes |
202848_s_at | GRK6 | 1.25E-05 | 4.08E-03 | 1.13 | MO | Inflammatory Response |
204524_at | PDPK1 | 1.42E-05 | 4.25E-03 | 1.36 | MO | Other Metabolic Processes |
211537_x_at | MAP3K7 | 1.55E-05 | 4.25E-03 | -1.28 | MO/MA | Inflammatory Response |
224883_at | PLDN | 1.57E-05 | 4.25E-03 | -1.27 | MO | Inflammatory Response |
205926_at | IL27RA | 1.70E-05 | 4.30E-03 | 1.75 | MO/MA | Inflammatory Response |
202264_s_at | TOMM40 | 1.90E-05 | 4.51E-03 | 1.24 | MO/MA | Inflammatory Response |
210995_s_at | TRIM23 | 1.91E-05 | 4.51E-03 | -1.67 | MO/MA | Other Metabolic Processes |
210809_s_at | POSTN | 1.98E-05 | 4.60E-03 | 1.19 | MO | Inflammatory Disease |
207904_s_at | LNPEP | 2.08E-05 | 4.73E-03 | -1.60 | MO/MA | Other Metabolic Processes |
226111_s_at | ZNF385A | 2.29E-05 | 4.95E-03 | 1.40 | MO | Hematological System Development and Function |
205400_at | WAS | 2.68E-05 | 5.31E-03 | 1.48 | MO/MA | Lipid Metabolism |
203709_at | PHKG2 | 2.87E-05 | 5.57E-03 | 1.21 | MA | Other Metabolic Processes |
209812_x_at | CASP2 | 3.02E-05 | 5.72E-03 | -1.26 | MO | Lipid Metabolism |
221957_at | PDK3 | 3.48E-05 | 6.13E-03 | -1.34 | MO/MA | Other Metabolic Processes |
1557145_at | STK38 | 3.61E-05 | 6.15E-03 | -1.50 | Â | Other Metabolic Processes |
217888_s_at | ARFGAP1 | 3.69E-05 | 6.18E-03 | 1.19 | MO | Inflammatory Disease |
204158_s_at | TCIRG1 | 3.98E-05 | 6.35E-03 | 1.28 | Â | Immunological Disease |
204150_at | STAB1 | 4.16E-05 | 6.47E-03 | 1.46 | Â | Inflammatory Response |
36936_at | TSTA3 | 4.17E-05 | 6.47E-03 | 1.16 | MO/MA | Carbohydrate Metabolism |
211652_s_at | LBP | 4.51E-05 | 6.57E-03 | 1.20 | MO | Lipid Metabolism |
225647_s_at | CTSC | 4.74E-05 | 6.80E-03 | -1.36 | MO | Inflammatory Disease |
200604_s_at | PRKAR1A | 6.14E-05 | 7.77E-03 | -1.54 | MO/MA | Other Metabolic Processes |
202804_at | ABCC1 | 6.52E-05 | 7.80E-03 | 1.15 | MO | Lipid Metabolism |
221563_at | DUSP10 | 6.60E-05 | 7.82E-03 | -1.26 | MO | Other Metabolic Processes |
207240_s_at | LHCGR | 7.14E-05 | 8.15E-03 | 1.09 | Â | Carbohydrate Metabolism |
206217_at | EDA | 7.32E-05 | 8.21E-03 | 1.32 | MO/MA | Other Metabolic Processes |
208867_s_at | CSNK1A1 | 7.69E-05 | 8.34E-03 | -1.39 | MA | Other Metabolic Processes |
221770_at | RPE | 8.05E-05 | 8.40E-03 | -1.29 | MO/WBC/MA | Carbohydrate Metabolism |
207319_s_at | CDC2L5 | 8.46E-05 | 8.70E-03 | -1.59 | MO/MA | Hematological System Development and Function |
207764_s_at | HIPK3 | 9.28E-05 | 9.18E-03 | -1.57 | MO/MA | Other Metabolic Processes |
209532_at | PLAA | 9.57E-05 | 9.33E-03 | -1.19 | MO | Lipid Metabolism |
210333_at | NR5A1 | 9.76E-05 | 9.43E-03 | 1.37 | MO/WBC/MA | Hematological System Development and Function |
205546_s_at | TYK2 | 1.02E-04 | 9.67E-03 | 1.16 | MO | Inflammatory Response |
207201_s_at | SLC22A1 | 1.10E-04 | 9.97E-03 | 1.33 | MO/MA | Other Metabolic Processes |
213733_at | MYO1F | 1.11E-04 | 1.00E-02 | 1.15 | Â | Inflammatory Response |
214971_s_at | ST6GAL1 | 1.11E-04 | 1.00E-02 | -1.46 | MO/MA | Inflammatory Response |