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Table 3 Highly Significant Novel Differentially Expressed 200 bp Regions

From: A systematic comparison and evaluation of high density exon arrays and RNA-seq technology used to unravel the peripheral blood transcriptome of sickle cell disease

Chromosome

Start-Base −1

End- Base 200

Fold Change

p Value

chr1

203465800

203465999

18.69

0.00005

chr1

246094400

246094599

12.84

0.00018

chr1

144990000

144990199

4.96

0.00016

chr1

209819000

209819199

4.93

0.00022

chr1

554400

554599

0.44

0.00050

chr1

91770600

91770799

0.43

0.00030

chr1

157083400

157083599

0.33

0.00034

chr1

159838000

159838199

0.26

0.00025

chr2

177785200

177785399

9.45

0.00049

chr2

128992200

128992399

5.46

0.00038

chr2

91411400

91411599

3.38

0.00037

chr2

175293200

175293399

0.50

0.00037

chr2

207652800

207652999

0.35

0.00012

chr3

76567600

76567799

0.49

0.00029

chr4

154075400

154075599

10.11

0.00029

chr4

38368600

38368799

9.62

0.00004

chr4

154075800

154075999

7.75

0.00005

chr4

146763600

146763799

4.91

0.00035

chr4

146765600

146765799

4.82

0.00018

chr4

111338400

111338599

4.66

0.00028

chr4

146516600

146516799

0.39

0.00014

chr4

26043400

26043599

0.38

0.00045

chr5

176439200

176439399

5.84

0.00048

chr5

138854200

138854399

5.30

0.00014

chr5

138856400

138856599

3.34

0.00006

chr5

177142200

177142399

3.10

0.00046

chr5

43623000

43623199

0.46

0.00018

chr5

99410000

99410199

0.26

0.00010

chr6

53038000

53038199

10.59

0.00015

chr6

151297600

151297799

5.46

0.00021

chr6

28212400

28212599

2.43

0.00004

chr7

55681200

55681399

3.73

0.00047

chr7

5567000

5567199

0.48

0.00041

chr7

139365000

139365199

0.35

0.00034

chr8

41761600

41761799

8.49

0.00001

chr8

41762200

41762399

6.42

0.00046

chr8

130922200

130922399

0.34

0.00033

chr9

35101200

35101399

22.26

0.00009

chr9

35101400

35101599

18.75

0.00019

chr9

5101000

5101199

3.04

0.00020

chr9

79521600

79521799

0.38

0.00020

chr9

79523600

79523799

0.36

0.00014

chr10

13766600

13766799

12.54

0.00002

chr10

91112400

91112599

11.27

0.00042

chr10

75248600

75248799

0.37

0.00000

chr10

81901200

81901399

0.35

0.00036

chr11

5225800

5225999

24.75

0.00001

chr11

94542200

94542399

2.35

0.00002

chr11

117571400

117571599

0.37

0.00034

chr11

6193200

6193399

0.34

0.00012

chr12

111304400

111304599

9.16

0.00022

chr12

105247200

105247399

7.71

0.00033

chr12

88443200

88443399

3.83

0.00014

chr12

62331800

62331999

0.47

0.00032

chr13

74302000

74302199

7.60

0.00014

chr13

18137800

18137999

3.88

0.00013

chr14

65417400

65417599

6.12

0.00029

chr14

65417000

65417199

5.15

0.00033

chr14

52176600

52176799

0.36

0.00046

chr15

72689200

72689399

11.91

0.00011

chr15

72678200

72678399

6.26

0.00018

chr15

72688400

72688599

6.17

0.00014

chr15

72687200

72687399

5.89

0.00028

chr15

79393000

79393199

0.43

0.00002

chr17

39736800

39736999

9.65

0.00025

chr17

39632800

39632999

3.77

0.00047

chr17

35692200

35692399

0.43

0.00047

chr18

14383400

14383599

3.15

0.00016

chr19

51317000

51317199

7.49

0.00019

chr19

56938000

56938199

0.31

0.00035

chr20

55405400

55405599

13.85

0.00012

chr20

30909600

30909799

0.44

0.00014

chr20

1403000

1403199

0.29

0.00036

chr21

14058800

14058999

4.92

0.00006

chr22

29607600

29607799

12.14

0.00048

chr22

35263200

35263399

6.35

0.00047

chr22

43511000

43511199

2.97

0.00018

chr22

20569800

20569999

0.45

0.00029

chr22

22898800

22898999

0.34

0.00010

chrM

12600

12799

0.44

0.00026

chrX

55067400

55067599

5.80

0.00033

chrX

125434800

125434999

0.50

0.00005

chrX

143984400

143984599

0.41

0.00005

chrX

1389000

1389199

0.34

0.00037

chrY

3611200

3611399

8.93

0.00011

chrY

1389000

1389199

0.34

0.00037