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Table 4 List of significantly down-regulated genes expressed in the tibialis anterior and soleus muscles in EPO-d mice and control mice

From: Skeletal muscle alterations and exercise performance decrease in erythropoietin-deficient mice: a comparative study

Genes Entrez Gene ID Normalized ratio t-test P-value Description
Ckm 12715 0.52 0.00 creatine kinase, muscle
Eno3 13808 0.53 0.01 enolase 3, beta muscle
Serpinb2 18788 0.57 0.04 serine (or cysteine) peptidase inhibitor, clade B, member 2
Apool 68117 0.58 0.02 apolipoprotein O-like
Hspb7 29818 0.58 0.03 heat shock protein family, member 7 (cardiovascular)
Chac1 69065 0.60 0.04 ChaC, cation transport regulator-like 1 (E. coli)
Cln3 12752 0.61 0.01 ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
Nrap 18175 0.63 0.00 nebulin-related anchoring protein
Zyg11b 414872 0.63 0.00 zyg-ll homolog B (C. elegans)
Zp2 22787 0.65 0.00 zona pellucida glycoprotein 2
Atp1a2 98660 0.66 0.01 ATPase, Na+/K + transporting, alpha 2 polypeptide
Ctsd 13033 0.66 0.00 cathepsin D
Lrrc42 77809 0.66 0.01 leucine rich repeat containing 42
Ppp3ca 19055 0.67 0.01 protein phosphatase 3, catalytic subunit, alpha isoform
1600014E20Rik 71995 0.67 0.04 endogenous retroviral sequence 3
Kcnb1 16500 0.67 0.02 potassium voltage gated channel, Shab-related subfamily, member 1
1700052M18Rik 78415 0.68 0.04 RIKEN cDNA 1700052M18 gene
C1qtnf4 67445 0.68 0.03 C1q and tumor necrosis factor related protein 4
Setd3 52690 0.68 0.05 SET domain containing 3
Rtn2 20167 0.69 0.01 reticulon 2 (Z-band associated protein)
1110018H23Rik 68509 0.69 0.01 RIKEN cDNA 1110018H23 gene
Mgat2 217664 0.69 0.03 mannoside acetylglucosaminyltransferase 2
Smpd1 20597 0.70 0.02 sphingomyelin phosphodiesterase 1, acid lysosomal
Tbcc 72726 0.71 0.02 tubulin-specific chaperone c
Zfand5 22682 0.72 0.01 zinc finger, AN1-type domain 5
Tuba8 53857 0.72 0.02 tubulin, alpha 8
Fndc5 384061 0.73 0.02 fibronectin type III domain containing 5
Magea5 17141 0.73 0.04 melanoma antigen, family A, 5
Actg2 11468 0.73 0.03 actin, gamma 2, smooth muscle, enteric
Galnt14 71685 0.74 0.01 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14
2610019E17Rik 75614 0.74 0.01 RIKEN cDNA 2610019E17 gene
Scn4b 399548 0.74 0.00 sodium channel, type IV, beta
Olfr1370 258528 0.74 0.03 olfactory receptor 1370
Cbln2 12405 0.74 0.02 cerebellin 2 precursor protein
4933406C10Rik 74076 0.74 0.04 RIKEN cDNA 4933406C10 gene
Zfp618 72701 0.75 0.00 zinc fingerprotein 618
Slc2a4 6517 0.75 0.01 solute carrier family 2 (facilitated glucose transporter), member 4 [ Homo sapiens ]
Stx3 20908 0.75 0.01 syntaxin 3
Mdh2 4191 0.75 0.03 malate dehydrogenase 2, NAD (mitochondrial) [ Homo sapiens ]
Chchd6 66098 0.75 0.05 coiled-coil-helix-coiled-coil-helix domain containing 6
Gpsn2 106529 0.75 0.00 glycoprotein, synaptic 2
D230014K01Rik 217364 0.76 0.02 RIKEN cDNA D230014K01 gene
Zfp286 192651 0.76 0.04 zinc finger protein 286
Pctk1 18555 0.76 0.03 PCTAIRE-motif protein kinase 1
1700008N11Rik 75442 0.76 0.03 RIKEN cDNA 1700008N11 gene
1700015C15Rik 75532 0.76 0.02 RIKEN cDNA 1700015C15 gene
Uqcrc1 22273 0.76 0.00 ubiquinol-cytochrome c reductase core protein 1
Abi3 66610 0.77 0.02 ABI gene family, member 3
Vat1 26949 0.77 0.00 vesicle amine transport protein 1 homolog (T californica)
Snw1 66354 0.77 0.04 SNW domain containing 1
Eef1a2 13628 0.77 0.01 eukaryotic translation elongation factor 1 alpha 2
Nme5 75533 0.77 0.01 expressed in non-metastatic cells 5
Fxyd1 56188 0.77 0.03 FXYD domain-containing ion transport regulator 1
1700039E22Rik 73322 0.77 0.01 RIKEN cDNA 1700039E22 gene
Herpud1 64209 0.77 0.02 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
Pms2 18861 0.77 0.04 postmeiotic segregation increased 2 (S. cerevisiae)
Gli3 14634 0.77 0.05 GLI-Kruppel family member GLI3
Eef2 13629 0.78 0.01 eukaryotic translation elongation factor 2
Perld1 320655 0.78 0.03 per1-like domain containing 1
Pbxip1 229534 0.78 0.01 pre-B-cell leukemia transcription factor interacting protein 1
Ncf1 17969 0.78 0.03 neutrophil cytosolic factor 1
Olfr745 258296 0.78 0.03 olfactory receptor 745
Wfikkn2 278507 0.78 0.01 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2
Syngr2 20973 0.78 0.01 synaptogyrin 2
Eml4 78798 0.78 0.04 echinoderm microtubule associated protein like 4
4930564G21Rik 75321 0.78 0.03 RIKEN cDNA 4930564G21 gene
B230217C12Rik 68127 0.78 0.02 RIKEN cDNA B230217C12 gene
1810054G18Rik 75660 0.78 0.00 lin-37 homolog (C. elegans)
Psmd4 19185 0.78 0.01 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
Rab14 68365 0.78 0.04 RAB14, member RAS oncogene family
Slc15a4 100561 0.78 0.03 solute carrier family 15, member 4
Rcl1 59028 0.79 0.03 RNA terminal phosphate cyclase-like 1
Ndufa3 66091 0.79 0.01 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3
Tpmt 22017 0.79 0.02 thiopurine methyltransferase
Twf2 23999 0.79 0.01 twinfilin, actin-binding protein, homolog 2 (Drosophila)
Rbpjl 19668 0.79 0.01 recombination signal binding protein for immunoglobulin kappa J region-like
Gngt2 14710 0.79 0.04 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2
Lmln 239833 0.79 0.03 leishmanolysin-like (metallopeptidase M8 family)
Olfr1433 258680 0.79 0.01 olfactory receptor 1433
2210404E10Rik 72305 0.79 0.02 RIKEN cDNA 2210404E10 gene
Sod1 20655 0.79 0.05 superoxide dismutase 1, soluble
2310007L24Rik 75573 0.79 0.02 RIKEN cDNA 2310007L24 gene
Asrgl1 66514 0.79 0.00 asparaginase like 1
Wdr54 75659 0.79 0.02 WD repeat domain 54
Ociad2 433904 0.79 0.01 OCIA domain containing 2
Atg9a 245860 0.79 0.05 autophagy-related 9A (yeast)
Rbm38 56190 0.79 0.01 RNA binding motif protein 38
Psmb5 19173 0.79 0.02 proteasome (prosome, macropain) subunit, beta type 5
Slc30a9 109108 0.79 0.03 solute carrier family 30 (zinc transporter), member 9
Agr2 23795 0.79 0.02 anterior gradient 2 (Xenopus laevis)
Cpne3 70568 0.79 0.01 copine III
Tbc1d1 57915 0.80 0.03 TBC1 domain family, member 1
Cacng6 54378 0.80 0.04 calcium channel, voltage-dependent, gamma subunit 6
5730494M16Rik 66648 0.80 0.01 RIKEN cDNA 5730494M16 gene
Olfr127 258374 0.80 0.03 olfactory receptor 127
4933408N05Rik 71122 0.80 0.03 RIKEN cDNA 4933408N05 gene
4930547E14Rik 75145 0.80 0.01 RIKEN cDNA 4930547E14 gene
Dhrs1 52585 0.80 0.00 dehydrogenase/reductase (SDR family) member 1
Bcat2 12036 0.80 0.01 branched chain aminotransferase 2, mitochondrial
1700012J22Rik 75496 0.80 0.04 RIKEN cDNA 1700012J22 gene
Efcbp2 117148 0.80 0.00 EF hand calcium binding protein 2
Rab23 19335 0.80 0.02 RAB23, member RAS oncogene family
Gpld1 14756 0.80 0.00 glycosylphosphatidylinositol specific phospholipase D1
Tomm40 53333 0.80 0.05 translocase of outer mitochondrial membrane 40 homolog (yeast)
Tln1 21894 0.80 0.01 talin 1
Tsc22d4 78829 0.80 0.01 TSC22 domain family 4
Dnahc1 110084 0.80 0.03 dynein, axonemal, heavy chain 1
1700128I11Rik 73615 0.80 0.03 RIKEN cDNA 1700128I11 gene
Tcf4 21413 0.80 0.01 transcription factor 4
  1. A p-value <0.05 indicates that the expression ratio differed significantly from 1.
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BMC Medical Genomics

ISSN: 1755-8794

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