Table 1 GRAIL analysis of associations to over- and under-expressed pathways of GBMs

SNP_A-1731917

10

13

PTEN

SNP_A-1705677

4

17

TMPRSS11A

SNP_A-1656043

7

10

EGFR

SNP_A-1668058

4

11

BMPR1B

SNP_A-1742783

10

8

PLCE1

SNP_A-1654343

4

9

EGF

SNP_A-1662548

10

8

HABP2

SNP_A-1669535

4

9

ABCG2

SNP_A-1686878

10

8

FAS

SNP_A-1751745

4

8

ABCG2

SNP_A-1754053

10

7

PIK3AP1

SNP_A-1705909

4

8

MAPK10

SNP_A-1720407

7

6

EGFR

SNP_A-1741853

1

6

C1orf64

SNP_A-1724476

10

6

C10orf46

SNP_A-1706913

1

5

PRDM2

SNP_A-1730020

10

5

CCDC7

SNP_A-1673860

16

5

CDH13

SNP_A-1731857

10

5

BAG3

SNP_A-1697048

16

3

CDH13

SNP_A-1679064

10

4

HABP2

SNP_A-1749105

12

3

EPS8

SNP_A-1747199

7

3

EPHB6

SNP_A-1728851

10

3

MGMT

SNP_A-1674301

20

3

RBL1

SNP_A-1716085

1

3

STMN1

SNP_A-1721335

7

3

CAV2

SNP_A-1652906

4

2

IGFBP7

SNP_A-1683894

7

3

GHRHR

SNP_A-1658232

1

2

STMN1

SNP_A-1661029

7

2

NOS3

SNP_A-1721335

7

2

CAV2

SNP_A-1694743

4

2

PI4K2B

SNP_A-1651620

11

2

FGF19

SNP_A-1732612

17

2

NF1

SNP_A-1661013

16

2

CYLD

SNP_A-1695427

17

2

KSR1

SNP_A-1739981

12

2

KRAS

SNP_A-1741009

10

2

CCDC7

SNP_A-1655097

4

2

KDR

SNP_A-1720403

7

2

BRAF

SNP_A-1750171

1

2

FRAP1

SNP_A-1745332

4

2

INPP4B

SNP_A-1723196

3

2

BCL6

SNP_A-1747257

10

2

IL2RA

SNP_A-1687110

1

2

C1orf64

SNP_A-1647840

10

2

RET

SNP_A-1710047

20

2

JAG1

SNP_A-1663346

7

2

CDK6

SNP_A-1728851

10

2

MGMT