Skip to main content

Table 1 Genes used in the qPCR validation study

From: Microarray characterization of gene expression changes in blood during acute ethanol exposure

Probeset Gene EDGE LPE Timecourse
   Q-value Q-rank P-value (= < 0.05) Microarray fold change Blood alcohol concentration (BAC) significant point comparisons T2hoteling score
Normalizers
  201389_at ITGA5 0.0063 312 NA^ NA NA 12.12
  204613_at PLCG2 0.0648 2817 NA NA NA 21
218143_s_at SCAMP2 0.0161 829 NA NA NA 8.37
LPE selected genes
  226025_at ANKRD28 0.0114 563 0 1.689 BAC 2 vs 5 25.97
  204774_at   0.0452 2135 0.021 1.45 BAC 2 vs 5 95.59
     0 1.64 BAC 3 vs 4  
     0 1.95 BAC 3 vs 5  
  224840_at FKBP5 0.0347 1715 0.009 −1.54 BAC 1 vs 4 326.231
     0.044 −1.53 BAC 1 vs 5  
     0.025 −1.57 BAC 2 vs 4  
220532_s_at LR8 0.287 9699 0 −1.25 BAC 1 vs 4 9.52
EDGE selected genes
  203126_at IMPA2 0.0013 3 NA NA NA 82.828
221882_s_at TMEM8 0.0013 6 NA NA NA 85.406
  205627_at CDA 0.0013 11 NA NA NA 132.76
  208924_at RNF11* 0.0017 51 0.006 1.76 BAC2 vs 5 208.403
  1. *RNF11 is found on all three lists.
  2. ^NA Not Applicable, P-value > 0.05, not on gene list for given analysis method.
  3. Bold-Not on the TIMECOURSE50 list.