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Table 2 Summary statistics of variants or genes after each bioinformatic filter

From: Whole transcriptome sequencing identifies tumor-specific mutations in human oral squamous cell carcinoma

 

Patient 33

Patient 51

Sum

 

Normal

Tumor

Normal

Tumor

 

Raw

44,185

41,645

41,970

16,600

144,400

After filter 1

33,112

31,285

34,164

13,020

111,581

After filter 2

23,869

24,950

24,636

11,811

85,266

After filter 3

20,175

21,246

20,861

8,190

70,472

Coding

9,367

10,295

8,870

3,476

32,008

Disruptive

8,058

8,827

7,590

2,835

27,310

Disruptive genes

4,454

4,758

4,404

2,076

15,692

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BMC Medical Genomics

ISSN: 1755-8794

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