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Table 2 Histone modification ChIP-seq reads and peak calls

From: ChIP-seq in steatohepatitis and normal liver tissue identifies candidate disease mechanisms related to progression to cancer

 

Control

ASH

 

Total reads

Aligned reads

Dup. rate

Peaks

Total reads

Aligned reads

Dup. rate

Peaks

H3K4me1

17.8 M

11.4 M

0.5%

10255

27.6 M

19.6 M

4.8%

10673

H3K4me3

14.5 M

8.7 M

0.8%

14667

28.7 M

24.7 M

2.5%

18357

H3K27ac

12.7 M

9.4 M

0.5%

11655

27.2 M

21 M

2.6%

12384

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BMC Medical Genomics

ISSN: 1755-8794

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