Skip to main content

Advertisement

Table 2 Histone modification ChIP-seq reads and peak calls

From: ChIP-seq in steatohepatitis and normal liver tissue identifies candidate disease mechanisms related to progression to cancer

  Control ASH
  Total reads Aligned reads Dup. rate Peaks Total reads Aligned reads Dup. rate Peaks
H3K4me1 17.8 M 11.4 M 0.5% 10255 27.6 M 19.6 M 4.8% 10673
H3K4me3 14.5 M 8.7 M 0.8% 14667 28.7 M 24.7 M 2.5% 18357
H3K27ac 12.7 M 9.4 M 0.5% 11655 27.2 M 21 M 2.6% 12384