Table 4 Number of significant differentially methylated loci detected for given cutoff p-value based on the real data.
Method | 1e-3 | 1e-4 | 1e-5 | 1e-6 | ||||
|---|---|---|---|---|---|---|---|---|
| Â | Fisher | Z-test | Fisher | Z-test | Fisher | Z-test | Fisher | Z-test |
ANOVA | 981 | 1079 | 655 | 690 | 479 | 499 | 350 | 375 |
Median | 906 | 893 | 464 | 449 | 255 | 240 | 143 | 127 |
Welch | 1096 | 1106 | 640 | 673 | 416 | 424 | 281 | 289 |
K-W | 1359 | 1340 | 823 | 859 | 551 | 590 | 381 | 401 |