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Table 4 Number of significant differentially methylated loci detected for given cutoff p-value based on the real data.

From: Detecting differentially methylated loci for Illumina Array methylation data based on human ovarian cancer data

Method 1e-3 1e-4 1e-5 1e-6
  Fisher Z-test Fisher Z-test Fisher Z-test Fisher Z-test
ANOVA 981 1079 655 690 479 499 350 375
Median 906 893 464 449 255 240 143 127
Welch 1096 1106 640 673 416 424 281 289
K-W 1359 1340 823 859 551 590 381 401