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Table 5 Classifier comparison based on ACC differences over all tested pathways.

From: A categorical network approach for discovering differentially expressed regulations in cancer

GSE data sets

BNKL-SVM

BNKL-LAS

BNKL-PC

BRS1, BRS2

2.65 (0)

3.32 (0)

0.86 (0)

BER1, BER2

0.45 (0.08)

2.04 (0)

6.89 (0)

BER2, BER3

3.26 (0)

-1.32 (0)

10.58 (0)

BER3, BER4

6.33 (0)

-2.01 (0)

7.59 (0)

BER1, BER3

2.32 (0)

0.20 (0.14)

5.09 (0)

BER1, BER4

3.64 (0)

0.42 (0.02)

3.37 (0)

BER2, BER4

2.79 (0)

2.04 (0)

12.64 (0)

LNG1, LNG2

-1.18 (0)

-1.56 (0)

5.43 (0)

LNG1, LNG3

-1.35 (0)

4.67 (0)

12.68 (0)

LNG2, LNG3

-2.37 (0)

-0.60 (0.17)

8.47 (0)

GST1, GST2

5.23 (0)

-0.95 (.07)

20.48 (0)

GST3, GST2

-1.41 (0)

-1.47 (0)

12.37 (0)

GST1, GST3

3.77 (0)

0.27 (0.56)

15.25 (0)

KDN1, KDN2

2.17 (0)

3.72 (0)

23.98 (0)

KDN1, KDN3

5.06 (0)

2.34 (0)

22.87 (0)

KDN3, KDN2

-1.72 (0)

0.90 (0)

31.27 (0)

  1. Shown are the median differences and, in parentheses, the Mann-Whitney test p-values (those less than 0.01 are set to 0).