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Table 4 WES and WGS samples used in different concordance experiments

From: Analytical validation of whole exome and whole genome sequencing for clinical applications

Experiment WES comparison sets WGS comparison sets
Intra-run reproducibility NA12878: r1-1-1 vs. r1-1-2 NA12878: r1-1-1 vs. r1-1-3
  NA18507: r2-1-2 vs. r2-1-3 NA18507: r2-1-3 vs. r2-1-4
Inter-run reproducibility NA18507: r2-1-2 vs. r3-1-2 NA18507: r2-1-3 vs. r3-1-3
  NA18507: r2-1-3 vs. r3-1-2 NA18507: r2-1-4 vs. r3-1-3
  NA12878: r1-1-1 vs. r2-1-1 vs. r3-1-1 NA12878: r1-1-1 vs. r2-1-1 vs. r3-1-1
   NA12878: r2-2-1 vs. r3-2-1
Inter-machine reproducibility NA12878: r3-1-1 vs. r3-2-1 NA12878: r3-1-1 vs. r3-2-1
  NA12878: r4-1-1 vs. r4-2-1 NA12878: r2-1-1 vs. r2-2-1
  NA18507: r4-1-2 vs. r4-2-2  
Inter-mode reproducibility NA12878, NA18507, NA12891, NA12892 r4-*-* versus all others N/A