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Table 3 SNVs and indels in relevance to cancer

From: Whole genome sequencing reveals potential targets for therapy in patients with refractory KRASmutated metastatic colorectal cancer

Sample Chr Gene name Position Coding event Sequence change Substitution
CLN2 3 CPB1 150045158 SNV G/A R231Q
  6 ESR1 152423875 SNV C/T T431I
  10 TCF7L2 114907771 SNV G/A G424E
  11 INPPL1 71621016 SNV A/G E567G
  12 KRAS 25289548 SNV C/T G13D
  14 TGFβ3 75495381 SNV G/T Q381K
  18 BCL2 59136317 SNV C/A W188L
  18 PTPRM 8384547 SNV G/A V1415M
  10 MYST4 76460457 SNV C/T R1957W
  18 SMAD4 46858795 SNV T/G L540R
  19 SHANK1 55864301 SNV G/A R910C
  21 HUNK 32293208 SNV G/A R662Q
  3 PIK3CA 180399422 SNV G/A NA
  1 PTPRC 196985273 SNV G/A S852N
  13 MLNR 48693327 Indel cccgg−/−ccgcc Insertion
  2 SLC4A10 162427730 Indel atcag−/−aaaa Insertion
  6 UTRN 145111149 Indel AAAT-g-GGAAA Frameshift
  7 HNRNPA2B1 26202550 Indel CAGAT-cctcc-TCTAA Frameshift
CLN3 1 ARID1A 26973896 SNV G/T E1531
  2 LRP2 169845248 SNV T/C N400S
  3 MITF 70011193 SNV C/G S92C
  4 INPP4B 143222686 SNV C/A E864
  5 GPR98 89974441 SNV G/T V787L
  7 CYLN2 73409559 SNV C/A S344Y
  10 PTPRE 129758044 SNV G/A R369Q
  12 KRAS 25289551 SNV C/T G12D
  4 MAML3 26202550 Indel AAAT-ctg-CTGCT AA_Deletion
  6 PGC 140871034 Indel CCTGC-aga-AGAGC AA_Deletion
CLN4 1 ARID4B 233412380 SNV C/A R826M
  3 PIK3CA 180434779 SNV A/G H1048R
  4 KDR 55655861 SNV G/A R946C
  5 APC 112129944 SNV G/T G53V
  5 APC 112201150 SNV C/T Q654
  5 APC 112203580 SNV G/T E1464
  5 APC 112205360 SNV A/G K2057R
  6 PTCRA 42998820 SNV G/T V46F
  12 KRAS 25289552 SNV C/A G12C
  2 HOXD9 176696536 Indel cagcc-/gcagc Insertion