Table 2 Reproducibility between pathway profiles (PPs) of each data set and reference pathway profiles (RPPs)
From: Functional characterization of breast cancer using pathway profiles
Luminal A | Luminal B | Triple-negative | HER2+ | Average | |
|---|---|---|---|---|---|
PPs of TCGA RNA-Seq data set vs. RPPs | 88% | 90% | 79% | 91% | 87% |
PPs of TCGA microarray data set vs. RPPs | 76% | 80% | 89% | 85% | 83% |
PPs of EGA microarray data set vs. RPPs | 86% | 86% | 79% | 88% | 85% |