Table 2 Comparison of LENS with other available tools.
From: LENS: web-based lens for enrichment and network studies of human proteins
Tool | Required software | Network analyses | Enrichments | Suggested Use |
|---|---|---|---|---|
LENS | (None) | Shortest paths | Diseases, drugs, pathways, GWASs | Examine relatedness of genes and gene sets |
VisANT | Yes (Java) | Degree distribution | Gene Ontology | Examining networks at different resolutions (e.g. PPI networks and disease networks) |
UniHI | Yes (Flash) | Edge filters-1 | Gene Ontology, diseases | Generating and filter networks from different sources of PPIs |
GeneMANIA | Yes (Flash) | (None) | Gene Ontology | Enrichment and prioritization of genes by their Gene Ontology terms |