Pool 'A' (n=43) - DS AMKL (25,955 mapped loci following analysis by TRAM)
|
A1…A3 (n=3)
|
GSM491372…4
|
BM Sorted leukemic blasts
|
GPL570
|
Affymetrix U133 Plus 2.0
|
54,675
|
[18]
|
A4…A25 (n=22)
|
GSM94245, GSM94272…92
|
BM or PB
|
GPL96
|
Affymetrix U133A
|
22,283
|
[22]
|
A26…A31 (n=6)
|
GSM417985…90
|
BM or PB Sorted leukemic blasts
|
GPL570
|
Affymetrix U133 Plus 2.0
|
54,675
|
[17]
|
A32…A38 (n=7)
|
E-MEXP-72*
|
BMMC or PBMC
|
A-AFFY-33.adf.txt*
|
Affymetrix U133A
|
22,283
|
[21]
|
A39…A43 (n=5)
|
/
|
BMMC or PBMC
|
GPL96
|
Affymetrix U133A
|
22,283
|
[23]
|
Pool 'B' (n=45) - non-DS AMKL (26,045 mapped loci following analysis by TRAM)
|
B1-B2 (n=2)
|
GSM491370-1
|
BM Sorted leukemic blasts
|
GPL570
|
Affymetrix U133 Plus 2.0
|
54,675
|
[18]
|
B3…B23 (n=21)
|
GSM94221-4-5, GSM94227…32, GSM94234-5-7-8, GSM94240-2-3-8, GSM94256-9, GSM94261-2
|
BM or PB
|
GPL96
|
Affymetrix U133A
|
22,283
|
[22]
|
B24…B28 (n=5)
|
GSM39832-5, GSM39842-4, GSM39863
|
PBMC or BMMC
|
GPL8300
|
Affymetrix U95 Version 2
|
12,625
|
[19]
|
B29…B35 (n=7)
|
GSM361502…4, GSM361506…8, GSM361510
|
BM or PB
|
GPL96
|
Affymetrix U133A
|
22,283
|
[24]
|
B36…B40 (n=5)
|
GSM417991…5
|
BM or PB Sorted leukemic blasts
|
GPL570
|
Affymetrix U133 Plus 2.0
|
54,675
|
[18]
|
B41…B45 (n=5)
|
/
|
BMMC or PBMC
|
GPL96
|
Affymetrix U133A
|
22,283
|
[23]
|
Pool 'C' (n=20) - TMD (25,955 mapped loci following analysis by TRAM)
|
C1…C3 (n=3)
|
GSM491375…7
|
BM Sorted leukemic blasts
|
GPL570
|
Affymetrix U133 Plus 2.0
|
54,675
|
[18]
|
C4…C11 (n=8)
|
GSM94293…9, GSM94300
|
BM or PB
|
GPL96
|
Affymetrix U133A
|
22,283
|
[22]
|
C12…C20 (n=9)
|
E-MEXP-72*
|
BMMC or PBMC
|
A-AFFY-33.adf.txt*
|
Affymetrix U133A
|
22,283
|
[21]
|
Pool 'D' (n=19) - MK (26,372 mapped loci following analysis by TRAM)
|
D1-D2 (n=2)
|
GSM321577-8
|
MK (BM) (subj = pool)
|
GPL96
|
Affymetrix U133A
|
22,283
|
[45]
|
D3…D6 (n=4)
|
GSM112277-8, GSM112291-2
|
MK (PB) (subj = 1, rep. 1)
|
GPL887
|
Agilent 1A
|
22,575
|
[44]
|
D7-D8 (n=2)
|
GSM15648, GSM8649
|
MK (BM) (subj = 6)
|
GPL96
|
Affymetrix U133A
|
22,283
|
[42]
|
D9…D11 (n=3)
|
GSM88014-22-34
|
MK (PB) (subj = 1)
|
GPL887
|
Agilent 1A
|
22,575
|
[43]
|
D12…D18 (n=7)
|
GSM609746…52
|
CB
|
GPL4685
|
Affymetrix HT-HG_U133A
|
22,944
|
[40]
|
D19 (n=1)
|
E-MEXP-2146*
|
CB
|
A-AFFY-44.adf.txt
|
Affymetrix U133 Plus 2.0
|
54,675
|
[41]
|
Pool 'E' = D12…D19 (n=8) - CB MK (25,577 mapped loci following analysis by TRAM)
|