Table 2 Grade-CpG-containing genes identified in previous studies as differentially methylated in atherosclerosis or related metabolic conditions
From: The DNA methylation drift of the atherosclerotic aorta increases with lesion progression
Gene | CpG ID | Map | Correlation rho between Delta-M and lesion grade |
|---|---|---|---|
C1QL4 [29] | cg12760869 | Gene-body | 0.56 |
CTNNA3 [29] | cg04030146 | Gene-body | 0.54 |
cg07002403 | Gene-body | −0.53 | |
DCC [12] | cg24270629 | Gene-body | 0.52* |
ESR1 [30] | cg15626350 | Gene-body | 0.54 |
HSPA1A [31] | cg24888257 | First exon | 0.53 |
IMMT [29] | cg10973622 | Promoter | 0.55 |
LRP5 [31] | cg22151881 | Gene-body | 0.53 |
cg12016746 | Gene-body | 0.63 | |
cg25393429 | Gene-body | 0.54 | |
cg14624207 | Gene-body | 0.57 | |
PDGFA [32] | cg06464324 | Gene-body | 0.59 |
cg21473407 | Gene-body | 0.66 | |
cg23112425 | Gene-body | 0.54 | |
cg19788272 | Gene-body | 0.59 | |
cg01130922 | Gene-body | 0.57 | |
cg15454385 | Gene-body | 0.57 | |
SLC16A3 [33] | cg23664708 | 3′ UTR | 0.52 |