Fig. 1
From: Scalable and cost-effective NGS genotyping in the cloud
GenomeKey workflow and overall benchmarking study design. a GenomeKey workflow implements the GATK 3 best practices for genomic variant calling. Each arrow represents a stage of the workflow, and the level of parallelization for each stage is described in the Methods section under “Workflow”. b Deployment of the workflow on the Amazon Web Services Elastic Compute Cloud (EC2) infrastructure using the COSMOS workflow management engine