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Table 3 Top pathway results from GATHER analysis

From: Gene-expression patterns in peripheral blood classify familial breast cancer susceptibility

Term ID Term p-value
hsa04520 Adherens junction 0.00149
hsa00590 Prostaglandin and leukotriene metabolism 0.00775
hsa04350 TGF-beta signaling pathway 0.0132
hsa04510 Focal adhesion 0.014
  1. For genes that exhibited consistent fold-change directions in the Utah and Ontario gene-expression data (Additional files 7 and 8), we sorted the genes by average rank of fold change and t-test p-values. The 250 top-ranked genes were used to query GATHER [39] for KEGG pathways most strongly associated with this gene list. Pathways that attained a p-value less than 0.05 are shown