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Table 1 ENCODE RNA-Seq data used in this study

From: Differential expression analysis of human endogenous retroviruses based on ENCODE RNA-seq data

Cell type Tissue Condition   Number of replicates
Tier CSHL paired-end Caltech single-end Caltech paired-end
A549 Epithelium Cancer 2 2 - -
B-cells CD20+ Blood Normal 2 2 - -
GM12878 Blood Normal 1 2 2 2
H1-hESC ESC Normal 1 2 2 4
HUVEC Blood vessel Normal 2 2 2 2
HeLa-S3 Cervix Cancer 2 2 2 2
HepG2 Liver Cancer 2 2 2 2
IMR90 Lung Normal 2 2 - -
K562 Blood Cancer 1 2 2 2
MCF-7 Breast Cancer 2 2 - 3
Monocytes CD14+ Monocytes Normal 2 2 - -
SK-N-SH Brain Cancer 2 2 - -