From: Integrative regression network for genomic association study
Type | Properties | Lasso | GFLasso | SGL | SIOL | Corr. | Fused |
---|---|---|---|---|---|---|---|
Methylation network | Number of nodes | 557 | 418 | 338 | 468 | 552 | 394 |
Network density | 0.03 | 0.50 | 0.006 | 0.009 | 0.12 | 0.005 | |
Network diameter | 11 | 5 | 26 | 29 | 7 | 17 | |
Clustering coefficient | 0.52 | 0.73 | 0.28 | 0.23 | 0.60 | 0.14 | |
Average number of neighbors | 16.1 | 209.3 | 2.0 | 4.0 | 66.8 | 1.8 | |
Connected components | 16 | 42 | 79 | 50 | 1 | 85 | |
R 2 of node degree distribution | 0.52 | 0.28 | 0.87 | 0.40 | 0.37 | 0.87 | |
mRNA expression network | Number of nodes | 372 | 17 | 239 | 232 | 276 | 342 |
Network density | 0.29 | 0.09 | 0.011 | 0.009 | 0.04 | 0.012 | |
Network diameter | 7 | 3 | 10 | 21 | 9 | 17 | |
Clustering coefficient | 0.74 | 0.06 | 0.29 | 0.16 | 0.37 | 0.27 | |
Average number of neighbors | 110.7 | 1.4 | 2.71 | 2.0 | 10.3 | 4.1 | |
Connected components | 2 | 6 | 39 | 46 | 12 | 6 | |
R 2 of node degree distribution | 0.13 | 0.47 | 0.79 | 0.98 | 0.79 | 0.81 |