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Table 4 Network properties of methylation features and mRNA expression trails of Lung cancer profile

From: Integrative regression network for genomic association study

Type Properties Lasso GFLasso SGL SIOL Corr. Fused
Methylation network Number of nodes 557 418 338 468 552 394
Network density 0.03 0.50 0.006 0.009 0.12 0.005
Network diameter 11 5 26 29 7 17
Clustering coefficient 0.52 0.73 0.28 0.23 0.60 0.14
Average number of neighbors 16.1 209.3 2.0 4.0 66.8 1.8
Connected components 16 42 79 50 1 85
R 2 of node degree distribution 0.52 0.28 0.87 0.40 0.37 0.87
mRNA expression network Number of nodes 372 17 239 232 276 342
Network density 0.29 0.09 0.011 0.009 0.04 0.012
Network diameter 7 3 10 21 9 17
Clustering coefficient 0.74 0.06 0.29 0.16 0.37 0.27
Average number of neighbors 110.7 1.4 2.71 2.0 10.3 4.1
Connected components 2 6 39 46 12 6
R 2 of node degree distribution 0.13 0.47 0.79 0.98 0.79 0.81