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Table 4 Network properties of methylation features and mRNA expression trails of Lung cancer profile

From: Integrative regression network for genomic association study

Type

Properties

Lasso

GFLasso

SGL

SIOL

Corr.

Fused

Methylation network

Number of nodes

557

418

338

468

552

394

Network density

0.03

0.50

0.006

0.009

0.12

0.005

Network diameter

11

5

26

29

7

17

Clustering coefficient

0.52

0.73

0.28

0.23

0.60

0.14

Average number of neighbors

16.1

209.3

2.0

4.0

66.8

1.8

Connected components

16

42

79

50

1

85

R 2 of node degree distribution

0.52

0.28

0.87

0.40

0.37

0.87

mRNA expression network

Number of nodes

372

17

239

232

276

342

Network density

0.29

0.09

0.011

0.009

0.04

0.012

Network diameter

7

3

10

21

9

17

Clustering coefficient

0.74

0.06

0.29

0.16

0.37

0.27

Average number of neighbors

110.7

1.4

2.71

2.0

10.3

4.1

Connected components

2

6

39

46

12

6

R 2 of node degree distribution

0.13

0.47

0.79

0.98

0.79

0.81