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Table 1 Tumor purity estimated by CLImAT, APOLLOH, CLImAT-HET and ASCAT for TNBC samples

From: CLImAT-HET: detecting subclonal copy number alterations and loss of heterozygosity in heterogeneous tumor samples from whole-genome sequencing data

Sample

CLImAT

APOLLOHa

CLImAT-HET

ASCAT

SA220

0.44

0.80

0.62

0.62

SA223

0.60

0.65

0.66

0.69

SA224

0.50

0.79

0.52

0.55

SA225

0.76

0.86

0.75

0.74

SA227

0.47

0.70

0.50

0.43

  1. aThe tumor purities estimated by APOLLOH are obtained from a previous study [13]
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BMC Medical Genomics

ISSN: 1755-8794

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