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Table 1 Dataset description
| Dataset and Study | Dataset I: Simulation study | Dataset II: Validation case study 1 | Dataset III: Validation case study 2 |
|---|---|---|---|
| Type | Healthy lung tissues | Head and Neck squamous cell carcinomas | Breast invasive carcinoma |
| Source | TCGA | TCGA | TCGA |
| Date | March 2013 | May 2015 | October 2016 |
| Platform | Illumina RNA-Seq V.2 | Illumina RNA-Seq V.2 | Illumina RNA-Seq V.2 |
| Genes mapped | 20,502 | 20,501 | 20,501 |
| Patients | |||
| Total | 55 | 45 pairs | 112 pairs |
| Healthy | 55 | 45 | 112 |
| Tumor | not applicable | 45 | 112 |
| URL | https://tcga-data.nci.nih.gov | https://tcga-data.nci.nih.gov | https://tcga-data.nci.nih.gov |
