Table 5 Quantitative results for the three queries performed during the iDash competition
From: Efficient and secure outsourcing of genomic data storage
Query | 1a | 2a | 3a |
Data preparation (s) | 0.04 | 0.4 | 20.2 |
Size of VCF file (Mbytes) | 0.3 | 4.72 | 235.9 |
Importation (s) | 0.12 | 1.89 | 94.5 |
PIR query generation (s) | 0.04 | 0.05 | 0.67 |
Sending query (s) | 4.77 | 5.03 | 62.9 |
PIR reply generation (s) | 0.29 | 4.27 | 53.4 |
Sending reply (s) | 0.53 | 5.19 | 64.9 |
Reply extraction (s) | 0.34 | 4.41 | 55.1 |
Round-trip-time (s) | 5.5 ±.02 | 13.3 ±.1 | 128.1 ±.1 |
Query | 1b | 2b | 3b |
Data preparation (s) | 0.037 | 0.36 | 19.2 |
Size of VCF file (Mbytes) | 0.06 | 0.79 | 39.5 |
Importation (s) | 0.002 | 0.03 | 1.4 |
PIR query generation (s) | 0.008 | 0.016 | 0.2 |
Sending query (s) | 0.736 | 1.78 | 22.3 |
PIR reply generation (s) | 0.008 | 0.1 | 1.27 |
Sending reply (s) | 0.31 | 1.15 | 14.5 |
Reply extraction (s) | 0.05 | 0.16 | 2.05 |
Round-trip-time (s) | 1.07 ±.01 | 2.95 ±.004 | 37 ±.5 |