Table 6 Haplogroups for 33 in-house samples using 143 markers from the Infinium QC array (HaploGrep 2) and all sequence data (Phy-Mer)
Sample ID | HaploGrep 2 (Human QC array) | Phy-Mer (CES data) |
|---|---|---|
CPM10 | C1d1 | C1d1c1 |
CPM11 | HV | B4a1a1 |
CPM12 | N | A2w1 |
CPM13 | H | H5a3b |
CPM14 | N | A2d1 |
CPM15 | N | A2–64 |
CPM16 | N | W1 |
CPM17 | N | A2–64-@153 |
CPM18 | C1b14 | C1b14 |
CPM19 | HV2 | B4c1b2a2 |
NA12878 | H | H13a1a1a |
CPM20 | N | A2r |
CPM21 | D4 | D1h1 |
CPM22 | D4 | D1 |
CPM23 | C1c | C1c |
CPM24 | B2 | B2v |
CPM25 | T | T2b |
CPM26 | C | C1b7a |
CPM27 | H | H48 |
CPM28 | N | A2 |
CPM29 | M | M7c1a4a |
CPM30 | HV | R9b2 |
CPM31 | M | M7c1a4a |
CPM32 | C | C1d |
CPM33 | C | C1d |
CPM34 | C | C1d-194 |
CPM36 | N | A2 |
CPM4 | L3 | L3b1a |
CPM5 | D4j | D4j5 |
CPM6 | L2a1c | L2a1c5 |
CPM7 | A5 | A5a |
CPM8 | N | A2w1 |
CPM9 | K | K1a4b1 |