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Table 5 Regulatory miRNAs associated with the common PD-specific genes identified in substantia nigra and the analysis of lncRNAs associated with these miRNAs

From: A meta-analysis of public microarray data identifies biological regulatory networks in Parkinson’s disease

Genes associated with PD

miRNAs associated with genes

lncRNAs associated with the miRNAs

SNCA

hsa-miR-93-3pb

AC012065.7,KCNQ1OT1, LINC00342

hsa-miR-153b

 

hsa-miR-23b-3pb

CASC7,CTC-459F4.3, KCNQ1OT1, RP11-215G15.5, SNHG14, TOB1-AS1, XIST, ZNRD1-AS1

hsa-miR-500a-5p

SNHG22

hsa-miR-34a-5pb

AC004951.6, AC092535.3, KCNQ1OT1, LINC00662, PCBP2-OT1, RP11-693 J15.5

hsa-miR-29a-3pa

AC005154.6, H19, KCNQ1OT1, LINC00674, MIR4697HG, NEAT1, RP11-314B1.2, RP11-582E3.6, RP4-630A11.3, THUMPD3-AS1, TTTY15, TUG1

hsa-miR-7-5pb

AC005154.6, DLX6-AS1, KCNQ1OT1, LINC01233, LINC01314, RP11-679B19.1, XIST

hsa-miR-181a-2-3p

KCNQ1OT1, NEAT1

  1. aPreviously associated with several neurodegenerative diseases, but not PD
  2. bPreviously associated with PD