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Table 9 SNPs with their associated miRNAs and genes in neurodegenerative diseases other than PD

From: A meta-analysis of public microarray data identifies biological regulatory networks in Parkinson’s disease

MicroRNAs SNPs Allele Chromosome Gene MinorAlleleCount Region SNPs related diseases by experimentally_confirmed
hsa-miR-4428 rs1049853 C/T 6:31269123 HLA-C A = 0.0903/452 3’UTR Alzheimer’s disease, Rheumatoid arthritis
hsa-miR-27a-5p rs1016860 A/G 18:63127841 BCL2 T = 0.1166/584 3’UTR Multiple sclerosis
hsa-miR-3127-5p rs1016860 A/G 18:63127841 BCL2 T = 0.1166/584 3’UTR
hsa-miR-3158-3p rs1016860 A/G 18:63127841 BCL2 T = 0.1166/584 3’UTR
hsa-miR-4720-3p rs1016860 A/G 18:63127841 BCL2 T = 0.1166/584 3’UTR
hsa-miR-4789-5p rs1016860 A/G 18:63127841 BCL2 T = 0.1166/584 3’UTR
hsa-miR-629-5p rs1016860 A/G 18:63127841 BCL2 T = 0.1166/584 3’UTR
hsa-miR-1224-5p rs1058929 A/G/T 16:8853394 CARHSP1 C = 0.4740/2374 3’UTR Alzheimer’s disease
hsa-miR-1265 rs1058929 A/G/T 16:8853394 CARHSP1 C = 0.4740/2374 3’UTR
hsa-miR-3605-5p rs1058929 A/G/T 16:8853394 CARHSP1 C = 0.4740/2374 3’UTR
hsa-miR-3915 rs1058929 A/G/T 16:8853394 CARHSP1 C = 0.4740/2374 3’UTR
hsa-miR-4710 rs1058929 A/G/T 16:8853394 CARHSP1 C = 0.4740/2374 3’UTR
hsa-miR-5585-5p rs1058929 A/G/T 16:8853394 CARHSP1 C = 0.4740/2374 3’UTR
hsa-miR-193a-5p rs9953 G/T 16:8853271 CARHSP1 G = 0.4507/2257 3’UTR Alzheimer’s disease, glioblastoma
hsa-miR-3190-3p rs9953 G/T 16:8853271 CARHSP1 G = 0.4507/2257 3’UTR
hsa-miR-3615 rs9953 G/T 16:8853271 CARHSP1 G = 0.4507/2257 3’UTR
hsa-miR-335-5p rs1058967 A/G 16:8853179 CARHSP1 C = 0.4744/2376 3’UTR Alzheimer’s disease
hsa-miR-451b rs1058967 A/G 16:8853179 CARHSP1 C = 0.4744/2376 3’UTR
hsa-miR-4533 rs1058967 A/G 16:8853179 CARHSP1 C = 0.4744/2376 3’UTR
hsa-miR-4797-5p rs1058967 A/G 16:8853179 CARHSP1 C = 0.4744/2376 3’UTR
hsa-miR-3679-3p rs2447924 G/T 16:8854616 CARHSP1 C = 0.4754/2381 3’UTR Alzheimer’s disease
hsa-miR-4286 rs2447924 G/T 16:8854616 CARHSP1 C = 0.4754/2381 3’UTR
hsa-miR-4517 rs8017316 C/G 14:50322860 ATP5S G = 0.4511/2259 Intron Alzheimer’s disease